RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
SCAP-215ENST00000545718 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
SCAP-215ENST00000545718 KRTAP9-2Q9BYQ4 174 aa5.25□□□□□ -1.57
SCAP-215ENST00000545718 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
SCAP-215ENST00000545718 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
SCAP-215ENST00000545718 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
SCAP-215ENST00000545718 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
SCAP-215ENST00000545718 KRTAP2-3P0C7H8 128 aa5.18□□□□□ -1.58
SCAP-215ENST00000545718 KRTAP2-4Q9BYR9 128 aa5.18□□□□□ -1.58
SCAP-215ENST00000545718 KRTAP2-1Q9BYU5 128 aa5.18□□□□□ -1.58
SCAP-215ENST00000545718 MT1GP13640 62 aa5.16□□□□□ -1.58
SCAP-215ENST00000545718 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
SCAP-215ENST00000545718 MT1MQ8N339 61 aa5.09□□□□□ -1.6
SCAP-215ENST00000545718 MDN1Q9NU22 5596 aa5.08□□□□□ -1.6
SCAP-215ENST00000545718 SPRR2FQ96RM1 72 aa5.07□□□□□ -1.6
SCAP-215ENST00000545718 KRTAP9-6A0A140TA67 174 aa4.98□□□□□ -1.61
SCAP-215ENST00000545718 LCE5AQ5TCM9 118 aa4.89□□□□□ -1.63
SCAP-215ENST00000545718 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
SCAP-215ENST00000545718 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
SCAP-215ENST00000545718 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
SCAP-215ENST00000545718 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
SCAP-215ENST00000545718 SPRR2EP22531 72 aa4.69□□□□□ -1.66
SCAP-215ENST00000545718 SPRR2BP35325 72 aa4.69□□□□□ -1.66
SCAP-215ENST00000545718 SPRR2AP35326 72 aa4.69□□□□□ -1.66
SCAP-215ENST00000545718 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
SCAP-215ENST00000545718 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
SCAP-215ENST00000545718 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
SCAP-215ENST00000545718 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
SCAP-215ENST00000545718 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
SCAP-215ENST00000545718 MT1AP04731 61 aa4.52□□□□□ -1.69
SCAP-215ENST00000545718 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
SCAP-215ENST00000545718 SPRR2DP22532 72 aa4.48□□□□□ -1.69
SCAP-215ENST00000545718 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
SCAP-215ENST00000545718 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
SCAP-215ENST00000545718 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
SCAP-215ENST00000545718 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
SCAP-215ENST00000545718 NEBP20929 6669 aa4.28□□□□□ -1.72
SCAP-215ENST00000545718 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
SCAP-215ENST00000545718 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
SCAP-215ENST00000545718 PRM1P04553 51 aa4.16□□□□□ -1.74
SCAP-215ENST00000545718 MT3P25713 68 aa4.1□□□□□ -1.75
SCAP-215ENST00000545718 MT4P47944 62 aa4.09□□□□□ -1.75
SCAP-215ENST00000545718 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
SCAP-215ENST00000545718 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
SCAP-215ENST00000545718 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
SCAP-215ENST00000545718 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
SCAP-215ENST00000545718 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
SCAP-215ENST00000545718 LCE1DQ5T752 114 aa3.82□□□□□ -1.8
SCAP-215ENST00000545718 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
SCAP-215ENST00000545718 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
SCAP-215ENST00000545718 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
SCAP-215ENST00000545718 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
SCAP-215ENST00000545718 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
SCAP-215ENST00000545718 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
SCAP-215ENST00000545718 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
SCAP-215ENST00000545718 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
SCAP-215ENST00000545718 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
SCAP-215ENST00000545718 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
SCAP-215ENST00000545718 KRTAP5-10Q6L8G5 202 aa3.24□□□□□ -1.89
SCAP-215ENST00000545718 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
SCAP-215ENST00000545718 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
SCAP-215ENST00000545718 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
SCAP-215ENST00000545718 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
SCAP-215ENST00000545718 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
SCAP-215ENST00000545718 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
SCAP-215ENST00000545718 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
SCAP-215ENST00000545718 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
SCAP-215ENST00000545718 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
SCAP-215ENST00000545718 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
SCAP-215ENST00000545718 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
SCAP-215ENST00000545718 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
SCAP-215ENST00000545718 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
SCAP-215ENST00000545718 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
SCAP-215ENST00000545718 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
SCAP-215ENST00000545718 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
SCAP-215ENST00000545718 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
SCAP-215ENST00000545718 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms