RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 KRTAP2-1Q9BYU5 128 aa6.57□□□□□ -1.36
MSLN-202ENST00000545450 MACF1Q9UPN3 7388 aaKnown RBP6.5□□□□□ -1.37
MSLN-202ENST00000545450 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
MSLN-202ENST00000545450 MT1LQ93083 61 aa6.46□□□□□ -1.38
MSLN-202ENST00000545450 KRTAP4-7Q9BYR0 210 aa6.45□□□□□ -1.38
MSLN-202ENST00000545450 MUC12Q9UKN1 5478 aa6.42□□□□□ -1.38
MSLN-202ENST00000545450 SPRR2FQ96RM1 72 aa6.34□□□□□ -1.4
MSLN-202ENST00000545450 SYNE2Q8WXH0 6885 aaKnown RBP6.3□□□□□ -1.4
MSLN-202ENST00000545450 KRTAP19-3Q7Z4W3 81 aa6.27□□□□□ -1.41
MSLN-202ENST00000545450 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
MSLN-202ENST00000545450 MT1GP13640 62 aa6.2□□□□□ -1.42
MSLN-202ENST00000545450 KRTAP5-9P26371 169 aa6.19□□□□□ -1.42
MSLN-202ENST00000545450 MT1MQ8N339 61 aa6.18□□□□□ -1.42
MSLN-202ENST00000545450 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.43
MSLN-202ENST00000545450 KRTAP4-3Q9BYR4 195 aa6.14□□□□□ -1.43
MSLN-202ENST00000545450 MDN1Q9NU22 5596 aa6.12□□□□□ -1.43
MSLN-202ENST00000545450 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.11□□□□□ -1.43
MSLN-202ENST00000545450 LCE1AQ5T7P2 110 aa6.04□□□□□ -1.44
MSLN-202ENST00000545450 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
MSLN-202ENST00000545450 KRTAP6-3Q3LI67 103 aa5.98□□□□□ -1.45
MSLN-202ENST00000545450 SPRR2EP22531 72 aa5.96□□□□□ -1.46
MSLN-202ENST00000545450 SPRR2BP35325 72 aa5.96□□□□□ -1.46
MSLN-202ENST00000545450 SPRR2AP35326 72 aa5.96□□□□□ -1.46
MSLN-202ENST00000545450 DSTQ03001 7570 aaKnown RBP5.94□□□□□ -1.46
MSLN-202ENST00000545450 KRTAP12-4P60329 112 aa5.83□□□□□ -1.48
MSLN-202ENST00000545450 SPRR2DP22532 72 aa5.73□□□□□ -1.49
MSLN-202ENST00000545450 KRTAP9-7A8MTY7 169 aa5.71□□□□□ -1.5
MSLN-202ENST00000545450 NEBP20929 6669 aa5.58□□□□□ -1.52
MSLN-202ENST00000545450 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
MSLN-202ENST00000545450 LCE3BQ5TA77 95 aa5.54□□□□□ -1.52
MSLN-202ENST00000545450 MT1AP04731 61 aa5.51□□□□□ -1.53
MSLN-202ENST00000545450 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
MSLN-202ENST00000545450 KRTAP6-1Q3LI64 71 aa5.47□□□□□ -1.53
MSLN-202ENST00000545450 LCE3DQ9BYE3 92 aa5.34□□□□□ -1.55
MSLN-202ENST00000545450 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.55
MSLN-202ENST00000545450 LCE3EQ5T5B0 92 aa5.3□□□□□ -1.56
MSLN-202ENST00000545450 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
MSLN-202ENST00000545450 PRM1P04553 51 aa5.18□□□□□ -1.58
MSLN-202ENST00000545450 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
MSLN-202ENST00000545450 KRTAP2-2Q9BYT5 123 aa5.09□□□□□ -1.59
MSLN-202ENST00000545450 KRTAP20-1Q3LI63 56 aa5.05□□□□□ -1.6
MSLN-202ENST00000545450 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
MSLN-202ENST00000545450 MT4P47944 62 aa5.01□□□□□ -1.61
MSLN-202ENST00000545450 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
MSLN-202ENST00000545450 KRTAP6-2Q3LI66 62 aa5□□□□□ -1.61
MSLN-202ENST00000545450 MT3P25713 68 aa4.92□□□□□ -1.62
MSLN-202ENST00000545450 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
MSLN-202ENST00000545450 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
MSLN-202ENST00000545450 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
MSLN-202ENST00000545450 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
MSLN-202ENST00000545450 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
MSLN-202ENST00000545450 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
MSLN-202ENST00000545450 LCE1EQ5T753 118 aa4.21□□□□□ -1.73
MSLN-202ENST00000545450 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.74
MSLN-202ENST00000545450 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
MSLN-202ENST00000545450 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
MSLN-202ENST00000545450 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
MSLN-202ENST00000545450 KRTAP5-8O75690 187 aa4.04□□□□□ -1.76
MSLN-202ENST00000545450 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
MSLN-202ENST00000545450 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
MSLN-202ENST00000545450 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
MSLN-202ENST00000545450 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
MSLN-202ENST00000545450 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
MSLN-202ENST00000545450 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
MSLN-202ENST00000545450 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
MSLN-202ENST00000545450 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
MSLN-202ENST00000545450 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
MSLN-202ENST00000545450 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
MSLN-202ENST00000545450 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
MSLN-202ENST00000545450 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
MSLN-202ENST00000545450 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
MSLN-202ENST00000545450 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
MSLN-202ENST00000545450 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
MSLN-202ENST00000545450 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
MSLN-202ENST00000545450 PHGR1C9JFL3 82 aa3□□□□□ -1.93
MSLN-202ENST00000545450 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
MSLN-202ENST00000545450 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 107.2 ms