RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 HECTD4Q9Y4D8 3996 aa5.26□□□□□ -1.57
ARHGEF28-214ENST00000545377 LRP2P98164 4655 aa5.19□□□□□ -1.58
ARHGEF28-214ENST00000545377 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
ARHGEF28-214ENST00000545377 KRTAP19-2Q3LHN2 52 aa5.12□□□□□ -1.59
ARHGEF28-214ENST00000545377 EPPK1P58107 5090 aaKnown RBP5.08□□□□□ -1.6
ARHGEF28-214ENST00000545377 KRTAP4-9Q9BYQ8 210 aa5.02□□□□□ -1.61
ARHGEF28-214ENST00000545377 HYDINQ4G0P3 5121 aa4.99□□□□□ -1.61
ARHGEF28-214ENST00000545377 KMT2CQ8NEZ4 4911 aaKnown RBP4.98□□□□□ -1.61
ARHGEF28-214ENST00000545377 TNXBP22105 4242 aa4.97□□□□□ -1.61
ARHGEF28-214ENST00000545377 MT1AP04731 61 aa4.97□□□□□ -1.61
ARHGEF28-214ENST00000545377 LCE1CQ5T751 118 aa4.94□□□□□ -1.62
ARHGEF28-214ENST00000545377 LCE1EQ5T753 118 aa4.94□□□□□ -1.62
ARHGEF28-214ENST00000545377 LCE1FQ5T754 118 aa4.94□□□□□ -1.62
ARHGEF28-214ENST00000545377 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
ARHGEF28-214ENST00000545377 KRTAP2-3P0C7H8 128 aa4.93□□□□□ -1.62
ARHGEF28-214ENST00000545377 KRTAP2-4Q9BYR9 128 aa4.93□□□□□ -1.62
ARHGEF28-214ENST00000545377 FLGP20930 4061 aaPredicted RBP4.93□□□□□ -1.62
ARHGEF28-214ENST00000545377 SYNE2Q8WXH0 6885 aaKnown RBP4.92□□□□□ -1.62
ARHGEF28-214ENST00000545377 MUC17Q685J3 4493 aa4.92□□□□□ -1.62
ARHGEF28-214ENST00000545377 LCE2AQ5TA79 106 aaPredicted RBP4.88□□□□□ -1.63
ARHGEF28-214ENST00000545377 KRTAP2-1Q9BYU5 128 aa4.87□□□□□ -1.63
ARHGEF28-214ENST00000545377 FSIP2Q5CZC0 6907 aa4.86□□□□□ -1.63
ARHGEF28-214ENST00000545377 KRTAP6-3Q3LI67 103 aa4.84□□□□□ -1.63
ARHGEF28-214ENST00000545377 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
ARHGEF28-214ENST00000545377 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
ARHGEF28-214ENST00000545377 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
ARHGEF28-214ENST00000545377 KRTAP2-2Q9BYT5 123 aa4.74□□□□□ -1.65
ARHGEF28-214ENST00000545377 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
ARHGEF28-214ENST00000545377 ABCA13Q86UQ4 5058 aa4.69□□□□□ -1.66
ARHGEF28-214ENST00000545377 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
ARHGEF28-214ENST00000545377 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
ARHGEF28-214ENST00000545377 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
ARHGEF28-214ENST00000545377 MUC2Q02817 5179 aa4.61□□□□□ -1.67
ARHGEF28-214ENST00000545377 FAT4Q6V0I7 4981 aa4.58□□□□□ -1.68
ARHGEF28-214ENST00000545377 HMCN2Q8NDA2 5059 aa4.54□□□□□ -1.68
ARHGEF28-214ENST00000545377 RNF213Q63HN8 5207 aa4.52□□□□□ -1.69
ARHGEF28-214ENST00000545377 UBR4Q5T4S7 5183 aa4.48□□□□□ -1.69
ARHGEF28-214ENST00000545377 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
ARHGEF28-214ENST00000545377 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
ARHGEF28-214ENST00000545377 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
ARHGEF28-214ENST00000545377 KRTAP4-6Q9BYQ5 205 aa3.99□□□□□ -1.77
ARHGEF28-214ENST00000545377 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
ARHGEF28-214ENST00000545377 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
ARHGEF28-214ENST00000545377 NEBP20929 6669 aa3.93□□□□□ -1.78
ARHGEF28-214ENST00000545377 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
ARHGEF28-214ENST00000545377 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
ARHGEF28-214ENST00000545377 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
ARHGEF28-214ENST00000545377 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
ARHGEF28-214ENST00000545377 USH2AO75445 5202 aa3.87□□□□□ -1.79
ARHGEF28-214ENST00000545377 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
ARHGEF28-214ENST00000545377 FCGBPQ9Y6R7 5405 aaPredicted RBP3.84□□□□□ -1.79
ARHGEF28-214ENST00000545377 KRTAP5-9P26371 169 aa3.75□□□□□ -1.81
ARHGEF28-214ENST00000545377 KMT2DO14686 5537 aa3.64□□□□□ -1.83
ARHGEF28-214ENST00000545377 SSPOA2VEC9 5147 aa3.54□□□□□ -1.84
ARHGEF28-214ENST00000545377 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
ARHGEF28-214ENST00000545377 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
ARHGEF28-214ENST00000545377 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
ARHGEF28-214ENST00000545377 MDN1Q9NU22 5596 aa3.33□□□□□ -1.88
ARHGEF28-214ENST00000545377 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
ARHGEF28-214ENST00000545377 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
ARHGEF28-214ENST00000545377 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.9
ARHGEF28-214ENST00000545377 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
ARHGEF28-214ENST00000545377 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
ARHGEF28-214ENST00000545377 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
ARHGEF28-214ENST00000545377 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
ARHGEF28-214ENST00000545377 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
ARHGEF28-214ENST00000545377 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
ARHGEF28-214ENST00000545377 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
ARHGEF28-214ENST00000545377 KRTAP5-2Q701N4 177 aa2.43□□□□□ -2.02
ARHGEF28-214ENST00000545377 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
ARHGEF28-214ENST00000545377 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
ARHGEF28-214ENST00000545377 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
ARHGEF28-214ENST00000545377 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
ARHGEF28-214ENST00000545377 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
ARHGEF28-214ENST00000545377 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
ARHGEF28-214ENST00000545377 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
ARHGEF28-214ENST00000545377 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 19.6 ms