RNA–Protein interactions for RNA: ENST00000545328.6

SEC23A-203, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-203ENST00000545328 KRTAP4-3Q9BYR4 195 aa5.7□□□□□ -1.5
SEC23A-203ENST00000545328 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
SEC23A-203ENST00000545328 DSTQ03001 7570 aaKnown RBP5.64□□□□□ -1.51
SEC23A-203ENST00000545328 CRCT1Q9UGL9 99 aa5.63□□□□□ -1.51
SEC23A-203ENST00000545328 MT1GP13640 62 aa5.58□□□□□ -1.52
SEC23A-203ENST00000545328 KRTAP19-6Q3LI70 58 aa5.57□□□□□ -1.52
SEC23A-203ENST00000545328 LCE2DQ5TA82 110 aaPredicted RBP5.53□□□□□ -1.52
SEC23A-203ENST00000545328 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.53
SEC23A-203ENST00000545328 MT1MQ8N339 61 aa5.43□□□□□ -1.54
SEC23A-203ENST00000545328 KRTAP19-3Q7Z4W3 81 aa5.4□□□□□ -1.54
SEC23A-203ENST00000545328 SPRR2FQ96RM1 72 aa5.32□□□□□ -1.56
SEC23A-203ENST00000545328 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
SEC23A-203ENST00000545328 MACF1Q9UPN3 7388 aaKnown RBP5.28□□□□□ -1.56
SEC23A-203ENST00000545328 KRTAP9-2Q9BYQ4 174 aa5.25□□□□□ -1.57
SEC23A-203ENST00000545328 KRTAP12-4P60329 112 aa5.21□□□□□ -1.58
SEC23A-203ENST00000545328 LCE3BQ5TA77 95 aa5.21□□□□□ -1.58
SEC23A-203ENST00000545328 SYNE2Q8WXH0 6885 aaKnown RBP5.18□□□□□ -1.58
SEC23A-203ENST00000545328 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
SEC23A-203ENST00000545328 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
SEC23A-203ENST00000545328 MDN1Q9NU22 5596 aa5.14□□□□□ -1.59
SEC23A-203ENST00000545328 KRTAP6-1Q3LI64 71 aa5.01□□□□□ -1.61
SEC23A-203ENST00000545328 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
SEC23A-203ENST00000545328 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
SEC23A-203ENST00000545328 MT1AP04731 61 aa4.83□□□□□ -1.64
SEC23A-203ENST00000545328 LCE3DQ9BYE3 92 aa4.81□□□□□ -1.64
SEC23A-203ENST00000545328 SPRR2EP22531 72 aa4.78□□□□□ -1.64
SEC23A-203ENST00000545328 SPRR2BP35325 72 aa4.78□□□□□ -1.64
SEC23A-203ENST00000545328 SPRR2AP35326 72 aa4.78□□□□□ -1.64
SEC23A-203ENST00000545328 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
SEC23A-203ENST00000545328 KRTAP9-6A0A140TA67 174 aa4.74□□□□□ -1.65
SEC23A-203ENST00000545328 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
SEC23A-203ENST00000545328 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
SEC23A-203ENST00000545328 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
SEC23A-203ENST00000545328 PRM1P04553 51 aa4.69□□□□□ -1.66
SEC23A-203ENST00000545328 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.68□□□□□ -1.66
SEC23A-203ENST00000545328 KRTAP5-9P26371 169 aa4.68□□□□□ -1.66
SEC23A-203ENST00000545328 KRTAP2-2Q9BYT5 123 aa4.67□□□□□ -1.66
SEC23A-203ENST00000545328 SPRR2DP22532 72 aa4.54□□□□□ -1.68
SEC23A-203ENST00000545328 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
SEC23A-203ENST00000545328 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
SEC23A-203ENST00000545328 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
SEC23A-203ENST00000545328 MT3P25713 68 aa4.35□□□□□ -1.71
SEC23A-203ENST00000545328 NEBP20929 6669 aa4.28□□□□□ -1.72
SEC23A-203ENST00000545328 LCE1DQ5T752 114 aa4.23□□□□□ -1.73
SEC23A-203ENST00000545328 MT4P47944 62 aa4.14□□□□□ -1.75
SEC23A-203ENST00000545328 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
SEC23A-203ENST00000545328 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
SEC23A-203ENST00000545328 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
SEC23A-203ENST00000545328 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
SEC23A-203ENST00000545328 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
SEC23A-203ENST00000545328 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
SEC23A-203ENST00000545328 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
SEC23A-203ENST00000545328 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
SEC23A-203ENST00000545328 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
SEC23A-203ENST00000545328 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
SEC23A-203ENST00000545328 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.82
SEC23A-203ENST00000545328 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
SEC23A-203ENST00000545328 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
SEC23A-203ENST00000545328 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
SEC23A-203ENST00000545328 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.88
SEC23A-203ENST00000545328 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
SEC23A-203ENST00000545328 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
SEC23A-203ENST00000545328 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.9
SEC23A-203ENST00000545328 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
SEC23A-203ENST00000545328 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
SEC23A-203ENST00000545328 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
SEC23A-203ENST00000545328 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
SEC23A-203ENST00000545328 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
SEC23A-203ENST00000545328 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
SEC23A-203ENST00000545328 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
SEC23A-203ENST00000545328 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
SEC23A-203ENST00000545328 KRTAP5-7Q6L8G8 165 aa2.88□□□□□ -1.95
SEC23A-203ENST00000545328 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
SEC23A-203ENST00000545328 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
SEC23A-203ENST00000545328 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
SEC23A-203ENST00000545328 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
SEC23A-203ENST00000545328 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 67.7 ms