RNA–Protein interactions for RNA: ENST00000544583.6

ABR-205, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2 BASIC

Gene ABR, Length 5,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-205ENST00000544583 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
ABR-205ENST00000544583 FAT4Q6V0I7 4981 aa4.73□□□□□ -1.65
ABR-205ENST00000544583 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
ABR-205ENST00000544583 MT1MQ8N339 61 aa4.67□□□□□ -1.66
ABR-205ENST00000544583 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
ABR-205ENST00000544583 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
ABR-205ENST00000544583 MT4P47944 62 aa4.63□□□□□ -1.67
ABR-205ENST00000544583 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
ABR-205ENST00000544583 LOC100996750A0A140TA64 210 aa4.54□□□□□ -1.68
ABR-205ENST00000544583 HMCN2Q8NDA2 5059 aa4.53□□□□□ -1.68
ABR-205ENST00000544583 MT3P25713 68 aa4.51□□□□□ -1.69
ABR-205ENST00000544583 MUC2Q02817 5179 aa4.47□□□□□ -1.69
ABR-205ENST00000544583 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
ABR-205ENST00000544583 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
ABR-205ENST00000544583 PRM1P04553 51 aa4.38□□□□□ -1.71
ABR-205ENST00000544583 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
ABR-205ENST00000544583 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
ABR-205ENST00000544583 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
ABR-205ENST00000544583 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
ABR-205ENST00000544583 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
ABR-205ENST00000544583 MT1AP04731 61 aa4.3□□□□□ -1.72
ABR-205ENST00000544583 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
ABR-205ENST00000544583 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
ABR-205ENST00000544583 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.24□□□□□ -1.73
ABR-205ENST00000544583 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
ABR-205ENST00000544583 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
ABR-205ENST00000544583 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
ABR-205ENST00000544583 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.75
ABR-205ENST00000544583 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
ABR-205ENST00000544583 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
ABR-205ENST00000544583 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
ABR-205ENST00000544583 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
ABR-205ENST00000544583 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
ABR-205ENST00000544583 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.77
ABR-205ENST00000544583 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
ABR-205ENST00000544583 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
ABR-205ENST00000544583 USH2AO75445 5202 aa3.94□□□□□ -1.78
ABR-205ENST00000544583 FCGBPQ9Y6R7 5405 aaPredicted RBP3.87□□□□□ -1.79
ABR-205ENST00000544583 DSTQ03001 7570 aaKnown RBP3.8□□□□□ -1.8
ABR-205ENST00000544583 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
ABR-205ENST00000544583 KMT2DO14686 5537 aa3.73□□□□□ -1.81
ABR-205ENST00000544583 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
ABR-205ENST00000544583 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
ABR-205ENST00000544583 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
ABR-205ENST00000544583 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
ABR-205ENST00000544583 NEBP20929 6669 aa3.66□□□□□ -1.82
ABR-205ENST00000544583 SSPOA2VEC9 5147 aa3.61□□□□□ -1.83
ABR-205ENST00000544583 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
ABR-205ENST00000544583 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
ABR-205ENST00000544583 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
ABR-205ENST00000544583 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
ABR-205ENST00000544583 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
ABR-205ENST00000544583 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
ABR-205ENST00000544583 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
ABR-205ENST00000544583 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
ABR-205ENST00000544583 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
ABR-205ENST00000544583 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
ABR-205ENST00000544583 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
ABR-205ENST00000544583 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
ABR-205ENST00000544583 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
ABR-205ENST00000544583 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
ABR-205ENST00000544583 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
ABR-205ENST00000544583 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
ABR-205ENST00000544583 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
ABR-205ENST00000544583 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
ABR-205ENST00000544583 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
ABR-205ENST00000544583 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
ABR-205ENST00000544583 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
ABR-205ENST00000544583 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
ABR-205ENST00000544583 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
ABR-205ENST00000544583 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
ABR-205ENST00000544583 KRTAP5-1Q6L8H4 278 aa2.22□□□□□ -2.05
ABR-205ENST00000544583 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
ABR-205ENST00000544583 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
ABR-205ENST00000544583 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
ABR-205ENST00000544583 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
ABR-205ENST00000544583 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 227.4 ms