RNA–Protein interactions for RNA: ENST00000544392.5

CACUL1-207, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-207ENST00000544392 SPRR2GQ9BYE4 73 aa4.05□□□□□ -1.76
CACUL1-207ENST00000544392 MT2AP02795 61 aa4.03□□□□□ -1.76
CACUL1-207ENST00000544392 MT1FP04733 61 aa3.98□□□□□ -1.77
CACUL1-207ENST00000544392 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
CACUL1-207ENST00000544392 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
CACUL1-207ENST00000544392 KRTAP19-8Q3LI54 63 aa3.91□□□□□ -1.78
CACUL1-207ENST00000544392 TNP1P09430 55 aa3.9□□□□□ -1.79
CACUL1-207ENST00000544392 PP632Q6XCG6 107 aa3.86□□□□□ -1.79
CACUL1-207ENST00000544392 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
CACUL1-207ENST00000544392 C10orf95Q9H7T3 257 aa3.82□□□□□ -1.8
CACUL1-207ENST00000544392 SSPOA2VEC9 5147 aa3.82□□□□□ -1.8
CACUL1-207ENST00000544392 MT1BP07438 61 aa3.76□□□□□ -1.81
CACUL1-207ENST00000544392 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
CACUL1-207ENST00000544392 MT1XP80297 61 aa3.68□□□□□ -1.82
CACUL1-207ENST00000544392 LCE3AQ5TA76 89 aa3.67□□□□□ -1.82
CACUL1-207ENST00000544392 NEBP20929 6669 aa3.67□□□□□ -1.82
CACUL1-207ENST00000544392 USH2AO75445 5202 aa3.66□□□□□ -1.82
CACUL1-207ENST00000544392 FCGBPQ9Y6R7 5405 aaPredicted RBP3.63□□□□□ -1.83
CACUL1-207ENST00000544392 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
CACUL1-207ENST00000544392 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.83
CACUL1-207ENST00000544392 KRTAP19-6Q3LI70 58 aa3.59□□□□□ -1.83
CACUL1-207ENST00000544392 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
CACUL1-207ENST00000544392 GPR98Q8WXG9 6306 aa3.56□□□□□ -1.84
CACUL1-207ENST00000544392 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
CACUL1-207ENST00000544392 KRTAP8-1Q8IUC2 63 aa3.52□□□□□ -1.85
CACUL1-207ENST00000544392 KRTAP12-3P60328 96 aa3.48□□□□□ -1.85
CACUL1-207ENST00000544392 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
CACUL1-207ENST00000544392 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
CACUL1-207ENST00000544392 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
CACUL1-207ENST00000544392 MUC12Q9UKN1 5478 aa3.42□□□□□ -1.86
CACUL1-207ENST00000544392 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
CACUL1-207ENST00000544392 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
CACUL1-207ENST00000544392 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
CACUL1-207ENST00000544392 KMT2DO14686 5537 aa3.37□□□□□ -1.87
CACUL1-207ENST00000544392 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
CACUL1-207ENST00000544392 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
CACUL1-207ENST00000544392 SPRR5A0A1B0GTR4 108 aa3.26□□□□□ -1.89
CACUL1-207ENST00000544392 MDN1Q9NU22 5596 aa3.26□□□□□ -1.89
CACUL1-207ENST00000544392 KRTAP19-7Q3SYF9 63 aa3.25□□□□□ -1.89
CACUL1-207ENST00000544392 MT1EP04732 61 aa3.24□□□□□ -1.89
CACUL1-207ENST00000544392 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
CACUL1-207ENST00000544392 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
CACUL1-207ENST00000544392 SPRR2FQ96RM1 72 aa3.22□□□□□ -1.89
CACUL1-207ENST00000544392 MT1GP13640 62 aa3.19□□□□□ -1.9
CACUL1-207ENST00000544392 MT1LQ93083 61 aa3.18□□□□□ -1.9
CACUL1-207ENST00000544392 KRTAP19-3Q7Z4W3 81 aa3.16□□□□□ -1.9
CACUL1-207ENST00000544392 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
CACUL1-207ENST00000544392 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
CACUL1-207ENST00000544392 KRTAP2-1Q9BYU5 128 aa3.08□□□□□ -1.92
CACUL1-207ENST00000544392 SPRR2EP22531 72 aa3.06□□□□□ -1.92
CACUL1-207ENST00000544392 SPRR2BP35325 72 aa3.06□□□□□ -1.92
CACUL1-207ENST00000544392 SPRR2AP35326 72 aa3.06□□□□□ -1.92
CACUL1-207ENST00000544392 MT1MQ8N339 61 aa3.06□□□□□ -1.92
CACUL1-207ENST00000544392 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
CACUL1-207ENST00000544392 SPRR2DP22532 72 aa2.97□□□□□ -1.93
CACUL1-207ENST00000544392 INE1O15225 51 aa2.91□□□□□ -1.94
CACUL1-207ENST00000544392 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
CACUL1-207ENST00000544392 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
CACUL1-207ENST00000544392 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
CACUL1-207ENST00000544392 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
CACUL1-207ENST00000544392 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
CACUL1-207ENST00000544392 MT1AP04731 61 aa2.75□□□□□ -1.97
CACUL1-207ENST00000544392 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
CACUL1-207ENST00000544392 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
CACUL1-207ENST00000544392 KRTAP6-1Q3LI64 71 aa2.64□□□□□ -1.99
CACUL1-207ENST00000544392 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
CACUL1-207ENST00000544392 MUC5ACP98088 5654 aa2.55□□□□□ -2
CACUL1-207ENST00000544392 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2.01
CACUL1-207ENST00000544392 MT4P47944 62 aa2.52□□□□□ -2.01
CACUL1-207ENST00000544392 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
CACUL1-207ENST00000544392 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
CACUL1-207ENST00000544392 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
CACUL1-207ENST00000544392 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
CACUL1-207ENST00000544392 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
CACUL1-207ENST00000544392 PRM1P04553 51 aa2.06□□□□□ -2.08
CACUL1-207ENST00000544392 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
CACUL1-207ENST00000544392 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
CACUL1-207ENST00000544392 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms