RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 MUC12Q9UKN1 5478 aa4.41□□□□□ -1.7
MDH1-216ENST00000544381 PLAC4Q8WY50 150 aa4.37□□□□□ -1.71
MDH1-216ENST00000544381 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
MDH1-216ENST00000544381 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
MDH1-216ENST00000544381 LCE1FQ5T754 118 aa4.36□□□□□ -1.71
MDH1-216ENST00000544381 CAMK2N1Q7Z7J9 78 aa4.35□□□□□ -1.71
MDH1-216ENST00000544381 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.71
MDH1-216ENST00000544381 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
MDH1-216ENST00000544381 ROMO1P60602 79 aa4.31□□□□□ -1.72
MDH1-216ENST00000544381 KRTAP4-4Q9BYR3 166 aa4.29□□□□□ -1.72
MDH1-216ENST00000544381 KTN1-AS1Q86SY8 53 aa4.28□□□□□ -1.72
MDH1-216ENST00000544381 MT1BP07438 61 aa4.26□□□□□ -1.73
MDH1-216ENST00000544381 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
MDH1-216ENST00000544381 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
MDH1-216ENST00000544381 MDN1Q9NU22 5596 aa4.24□□□□□ -1.73
MDH1-216ENST00000544381 KMT2DO14686 5537 aa4.22□□□□□ -1.73
MDH1-216ENST00000544381 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.73
MDH1-216ENST00000544381 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
MDH1-216ENST00000544381 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.75
MDH1-216ENST00000544381 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
MDH1-216ENST00000544381 TNP1P09430 55 aa4.13□□□□□ -1.75
MDH1-216ENST00000544381 MT1XP80297 61 aa4.13□□□□□ -1.75
MDH1-216ENST00000544381 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
MDH1-216ENST00000544381 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
MDH1-216ENST00000544381 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
MDH1-216ENST00000544381 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
MDH1-216ENST00000544381 PP632Q6XCG6 107 aa4□□□□□ -1.77
MDH1-216ENST00000544381 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
MDH1-216ENST00000544381 SPRR2EP22531 72 aa3.91□□□□□ -1.78
MDH1-216ENST00000544381 SPRR2BP35325 72 aa3.91□□□□□ -1.78
MDH1-216ENST00000544381 SPRR2AP35326 72 aa3.91□□□□□ -1.78
MDH1-216ENST00000544381 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.79
MDH1-216ENST00000544381 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
MDH1-216ENST00000544381 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
MDH1-216ENST00000544381 GPR98Q8WXG9 6306 aa3.86□□□□□ -1.79
MDH1-216ENST00000544381 KRTAP8-1Q8IUC2 63 aa3.83□□□□□ -1.8
MDH1-216ENST00000544381 SPRR2DP22532 72 aa3.77□□□□□ -1.81
MDH1-216ENST00000544381 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
MDH1-216ENST00000544381 KRTAP19-5Q3LI72 72 aa3.75□□□□□ -1.81
MDH1-216ENST00000544381 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
MDH1-216ENST00000544381 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
MDH1-216ENST00000544381 KRTAP19-7Q3SYF9 63 aa3.68□□□□□ -1.82
MDH1-216ENST00000544381 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
MDH1-216ENST00000544381 DSTQ03001 7570 aaKnown RBP3.65□□□□□ -1.82
MDH1-216ENST00000544381 MT1EP04732 61 aa3.63□□□□□ -1.83
MDH1-216ENST00000544381 MT1LQ93083 61 aa3.55□□□□□ -1.84
MDH1-216ENST00000544381 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
MDH1-216ENST00000544381 HMCN1Q96RW7 5635 aa3.51□□□□□ -1.85
MDH1-216ENST00000544381 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
MDH1-216ENST00000544381 KRTAP19-3Q7Z4W3 81 aa3.49□□□□□ -1.85
MDH1-216ENST00000544381 MT1GP13640 62 aa3.47□□□□□ -1.85
MDH1-216ENST00000544381 LUZP6Q538Z0 58 aa3.46□□□□□ -1.85
MDH1-216ENST00000544381 MT1MQ8N339 61 aa3.42□□□□□ -1.86
MDH1-216ENST00000544381 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
MDH1-216ENST00000544381 MT4P47944 62 aa3.34□□□□□ -1.87
MDH1-216ENST00000544381 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
MDH1-216ENST00000544381 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
MDH1-216ENST00000544381 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
MDH1-216ENST00000544381 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
MDH1-216ENST00000544381 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
MDH1-216ENST00000544381 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.91
MDH1-216ENST00000544381 MT1AP04731 61 aa3.03□□□□□ -1.92
MDH1-216ENST00000544381 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
MDH1-216ENST00000544381 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
MDH1-216ENST00000544381 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
MDH1-216ENST00000544381 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
MDH1-216ENST00000544381 SYNE1Q8NF91 8797 aaKnown RBP2.93□□□□□ -1.94
MDH1-216ENST00000544381 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
MDH1-216ENST00000544381 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
MDH1-216ENST00000544381 INE1O15225 51 aa2.76□□□□□ -1.97
MDH1-216ENST00000544381 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
MDH1-216ENST00000544381 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
MDH1-216ENST00000544381 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
MDH1-216ENST00000544381 PRM1P04553 51 aa2.24□□□□□ -2.05
MDH1-216ENST00000544381 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
MDH1-216ENST00000544381 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
MDH1-216ENST00000544381 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 65.6 ms