RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 SPRR2FQ96RM1 72 aa5.27□□□□□ -1.57
SP140-213ENST00000543928 TNP1P09430 55 aa5.24□□□□□ -1.57
SP140-213ENST00000543928 CDC42SE1Q9NRR8 79 aa5.22□□□□□ -1.57
SP140-213ENST00000543928 MUC12Q9UKN1 5478 aa5.21□□□□□ -1.57
SP140-213ENST00000543928 NEBP20929 6669 aa5.17□□□□□ -1.58
SP140-213ENST00000543928 MDN1Q9NU22 5596 aa5.12□□□□□ -1.59
SP140-213ENST00000543928 SPRR2EP22531 72 aa5.11□□□□□ -1.59
SP140-213ENST00000543928 SPRR2BP35325 72 aa5.11□□□□□ -1.59
SP140-213ENST00000543928 SPRR2AP35326 72 aa5.11□□□□□ -1.59
SP140-213ENST00000543928 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
SP140-213ENST00000543928 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
SP140-213ENST00000543928 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.59
SP140-213ENST00000543928 PRAC1Q96KF2 57 aa5.09□□□□□ -1.59
SP140-213ENST00000543928 LCE1AQ5T7P2 110 aa5.08□□□□□ -1.6
SP140-213ENST00000543928 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
SP140-213ENST00000543928 MT1EP04732 61 aa5.04□□□□□ -1.6
SP140-213ENST00000543928 ROMO1P60602 79 aa5.02□□□□□ -1.61
SP140-213ENST00000543928 BRK1Q8WUW1 75 aa5□□□□□ -1.61
SP140-213ENST00000543928 SPRR2DP22532 72 aa4.94□□□□□ -1.62
SP140-213ENST00000543928 KRTAP19-3Q7Z4W3 81 aa4.93□□□□□ -1.62
SP140-213ENST00000543928 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
SP140-213ENST00000543928 KRTAP20-1Q3LI63 56 aa4.91□□□□□ -1.62
SP140-213ENST00000543928 MT1LQ93083 61 aa4.87□□□□□ -1.63
SP140-213ENST00000543928 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
SP140-213ENST00000543928 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
SP140-213ENST00000543928 MT1GP13640 62 aa4.85□□□□□ -1.63
SP140-213ENST00000543928 PP632Q6XCG6 107 aa4.8□□□□□ -1.64
SP140-213ENST00000543928 MT1MQ8N339 61 aa4.78□□□□□ -1.64
SP140-213ENST00000543928 MT3P25713 68 aa4.76□□□□□ -1.65
SP140-213ENST00000543928 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.73□□□□□ -1.65
SP140-213ENST00000543928 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
SP140-213ENST00000543928 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
SP140-213ENST00000543928 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
SP140-213ENST00000543928 PMAIP1Q13794 54 aa4.71□□□□□ -1.66
SP140-213ENST00000543928 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
SP140-213ENST00000543928 DSTQ03001 7570 aaKnown RBP4.65□□□□□ -1.66
SP140-213ENST00000543928 PRO0628Q9UI54 55 aa4.63□□□□□ -1.67
SP140-213ENST00000543928 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
SP140-213ENST00000543928 KRTAP5-11Q6L8G4 156 aa4.5□□□□□ -1.69
SP140-213ENST00000543928 KTN1-AS1Q86SY8 53 aa4.36□□□□□ -1.71
SP140-213ENST00000543928 KRTAP5-4Q6L8H1 288 aa4.35□□□□□ -1.71
SP140-213ENST00000543928 KRTAP5-5Q701N2 237 aaPredicted RBP4.34□□□□□ -1.71
SP140-213ENST00000543928 MT4P47944 62 aa4.3□□□□□ -1.72
SP140-213ENST00000543928 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
SP140-213ENST00000543928 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
SP140-213ENST00000543928 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
SP140-213ENST00000543928 MT1AP04731 61 aa4.15□□□□□ -1.75
SP140-213ENST00000543928 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
SP140-213ENST00000543928 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
SP140-213ENST00000543928 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
SP140-213ENST00000543928 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
SP140-213ENST00000543928 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
SP140-213ENST00000543928 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
SP140-213ENST00000543928 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
SP140-213ENST00000543928 AHNAK2Q8IVF2 5795 aa3.96□□□□□ -1.78
SP140-213ENST00000543928 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
SP140-213ENST00000543928 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
SP140-213ENST00000543928 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
SP140-213ENST00000543928 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
SP140-213ENST00000543928 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
SP140-213ENST00000543928 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
SP140-213ENST00000543928 KRTAP5-7Q6L8G8 165 aa3.62□□□□□ -1.83
SP140-213ENST00000543928 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
SP140-213ENST00000543928 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
SP140-213ENST00000543928 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
SP140-213ENST00000543928 MUC5ACP98088 5654 aa3.34□□□□□ -1.87
SP140-213ENST00000543928 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
SP140-213ENST00000543928 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
SP140-213ENST00000543928 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
SP140-213ENST00000543928 AHNAKQ09666 5890 aaKnown RBP3.15□□□□□ -1.9
SP140-213ENST00000543928 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
SP140-213ENST00000543928 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
SP140-213ENST00000543928 INE1O15225 51 aa2.69□□□□□ -1.98
SP140-213ENST00000543928 PRM1P04553 51 aa2.59□□□□□ -1.99
SP140-213ENST00000543928 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
SP140-213ENST00000543928 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
SP140-213ENST00000543928 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
SP140-213ENST00000543928 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 14.8 ms