RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 DMAC1Q96GE9 116 aa4.96□□□□□ -1.62
GABPB1-206ENST00000543881 PRO2289Q9P1D8 64 aa4.95□□□□□ -1.62
GABPB1-206ENST00000543881 P0C880 135 aa4.94□□□□□ -1.62
GABPB1-206ENST00000543881 A0A0A0MQY5 61 aa4.91□□□□□ -1.62
GABPB1-206ENST00000543881 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
GABPB1-206ENST00000543881 R4GN34 69 aa4.89□□□□□ -1.63
GABPB1-206ENST00000543881 GPR98Q8WXG9 6306 aa4.89□□□□□ -1.63
GABPB1-206ENST00000543881 M0QZ58 72 aa4.87□□□□□ -1.63
GABPB1-206ENST00000543881 KRTAP12-2P59991 146 aa4.87□□□□□ -1.63
GABPB1-206ENST00000543881 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
GABPB1-206ENST00000543881 KRTAP10-12P60413 245 aa4.73□□□□□ -1.65
GABPB1-206ENST00000543881 DSTQ03001 7570 aaKnown RBP4.71□□□□□ -1.66
GABPB1-206ENST00000543881 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
GABPB1-206ENST00000543881 K7ERS5 55 aa4.66□□□□□ -1.66
GABPB1-206ENST00000543881 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
GABPB1-206ENST00000543881 NDUFAF8A1L188 74 aa4.61□□□□□ -1.67
GABPB1-206ENST00000543881 A0A1B0GU33 70 aa4.58□□□□□ -1.68
GABPB1-206ENST00000543881 SPINT4Q6UDR6 99 aa4.58□□□□□ -1.68
GABPB1-206ENST00000543881 KRTAP13-4Q3LI77 160 aa4.57□□□□□ -1.68
GABPB1-206ENST00000543881 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
GABPB1-206ENST00000543881 CAMK2N1Q7Z7J9 78 aa4.48□□□□□ -1.69
GABPB1-206ENST00000543881 KRTAP19-7Q3SYF9 63 aa4.47□□□□□ -1.69
GABPB1-206ENST00000543881 HMCN1Q96RW7 5635 aa4.46□□□□□ -1.7
GABPB1-206ENST00000543881 MT1EP04732 61 aa4.43□□□□□ -1.7
GABPB1-206ENST00000543881 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
GABPB1-206ENST00000543881 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
GABPB1-206ENST00000543881 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
GABPB1-206ENST00000543881 MT4P47944 62 aa4.4□□□□□ -1.71
GABPB1-206ENST00000543881 A0A0D9SG42 100 aa4.38□□□□□ -1.71
GABPB1-206ENST00000543881 KRTAP5-10Q6L8G5 202 aa4.37□□□□□ -1.71
GABPB1-206ENST00000543881 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
GABPB1-206ENST00000543881 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
GABPB1-206ENST00000543881 MT1GP13640 62 aa4.27□□□□□ -1.73
GABPB1-206ENST00000543881 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
GABPB1-206ENST00000543881 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
GABPB1-206ENST00000543881 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
GABPB1-206ENST00000543881 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
GABPB1-206ENST00000543881 MT1MQ8N339 61 aa4.22□□□□□ -1.73
GABPB1-206ENST00000543881 MT1LQ93083 61 aa4.21□□□□□ -1.74
GABPB1-206ENST00000543881 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
GABPB1-206ENST00000543881 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
GABPB1-206ENST00000543881 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
GABPB1-206ENST00000543881 TNP1P09430 55 aa4.1□□□□□ -1.75
GABPB1-206ENST00000543881 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
GABPB1-206ENST00000543881 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
GABPB1-206ENST00000543881 INE1O15225 51 aa3.97□□□□□ -1.77
GABPB1-206ENST00000543881 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
GABPB1-206ENST00000543881 KRTAP5-5Q701N2 237 aaPredicted RBP3.89□□□□□ -1.79
GABPB1-206ENST00000543881 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
GABPB1-206ENST00000543881 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
GABPB1-206ENST00000543881 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
GABPB1-206ENST00000543881 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
GABPB1-206ENST00000543881 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
GABPB1-206ENST00000543881 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
GABPB1-206ENST00000543881 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
GABPB1-206ENST00000543881 KRTAP6-1Q3LI64 71 aa3.58□□□□□ -1.84
GABPB1-206ENST00000543881 MT1AP04731 61 aa3.57□□□□□ -1.84
GABPB1-206ENST00000543881 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
GABPB1-206ENST00000543881 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
GABPB1-206ENST00000543881 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
GABPB1-206ENST00000543881 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
GABPB1-206ENST00000543881 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.88
GABPB1-206ENST00000543881 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
GABPB1-206ENST00000543881 MT3P25713 68 aa3.26□□□□□ -1.89
GABPB1-206ENST00000543881 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
GABPB1-206ENST00000543881 LCE1FQ5T754 118 aa2.96□□□□□ -1.93
GABPB1-206ENST00000543881 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
GABPB1-206ENST00000543881 LCE1CQ5T751 118 aa2.84□□□□□ -1.96
GABPB1-206ENST00000543881 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
GABPB1-206ENST00000543881 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
GABPB1-206ENST00000543881 PHGR1C9JFL3 82 aa2.58□□□□□ -2
GABPB1-206ENST00000543881 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
GABPB1-206ENST00000543881 PRM1P04553 51 aa2.42□□□□□ -2.02
GABPB1-206ENST00000543881 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
GABPB1-206ENST00000543881 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
GABPB1-206ENST00000543881 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
GABPB1-206ENST00000543881 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 9.5 ms