RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 FCGBPQ9Y6R7 5405 aaPredicted RBP5.51□□□□□ -1.53
SCNN1A-221ENST00000543768 KRTAP9-6A0A140TA67 174 aa5.51□□□□□ -1.53
SCNN1A-221ENST00000543768 KRTAP2-3P0C7H8 128 aa5.36□□□□□ -1.55
SCNN1A-221ENST00000543768 KRTAP2-4Q9BYR9 128 aa5.36□□□□□ -1.55
SCNN1A-221ENST00000543768 KRTAP2-1Q9BYU5 128 aa5.36□□□□□ -1.55
SCNN1A-221ENST00000543768 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.56
SCNN1A-221ENST00000543768 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
SCNN1A-221ENST00000543768 MACF1Q9UPN3 7388 aaKnown RBP5.32□□□□□ -1.56
SCNN1A-221ENST00000543768 MUC12Q9UKN1 5478 aa5.31□□□□□ -1.56
SCNN1A-221ENST00000543768 MT1GP13640 62 aa5.3□□□□□ -1.56
SCNN1A-221ENST00000543768 MT1MQ8N339 61 aa5.3□□□□□ -1.56
SCNN1A-221ENST00000543768 LOC100996750A0A140TA64 210 aa5.26□□□□□ -1.57
SCNN1A-221ENST00000543768 SYNE2Q8WXH0 6885 aaKnown RBP5.23□□□□□ -1.57
SCNN1A-221ENST00000543768 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.21□□□□□ -1.58
SCNN1A-221ENST00000543768 SPRR2FQ96RM1 72 aa5.21□□□□□ -1.58
SCNN1A-221ENST00000543768 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
SCNN1A-221ENST00000543768 KRTAP9-7A8MTY7 169 aa5.01□□□□□ -1.61
SCNN1A-221ENST00000543768 DSTQ03001 7570 aaKnown RBP4.98□□□□□ -1.61
SCNN1A-221ENST00000543768 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
SCNN1A-221ENST00000543768 KRTAP6-3Q3LI67 103 aa4.96□□□□□ -1.62
SCNN1A-221ENST00000543768 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
SCNN1A-221ENST00000543768 MDN1Q9NU22 5596 aa4.88□□□□□ -1.63
SCNN1A-221ENST00000543768 KRTAP12-4P60329 112 aa4.81□□□□□ -1.64
SCNN1A-221ENST00000543768 SPRR2EP22531 72 aa4.78□□□□□ -1.64
SCNN1A-221ENST00000543768 SPRR2BP35325 72 aa4.78□□□□□ -1.64
SCNN1A-221ENST00000543768 SPRR2AP35326 72 aa4.78□□□□□ -1.64
SCNN1A-221ENST00000543768 KRTAP6-1Q3LI64 71 aa4.77□□□□□ -1.65
SCNN1A-221ENST00000543768 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
SCNN1A-221ENST00000543768 NEBP20929 6669 aa4.75□□□□□ -1.65
SCNN1A-221ENST00000543768 MT1AP04731 61 aa4.74□□□□□ -1.65
SCNN1A-221ENST00000543768 KRTAP5-5Q701N2 237 aaPredicted RBP4.74□□□□□ -1.65
SCNN1A-221ENST00000543768 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
SCNN1A-221ENST00000543768 SPRR2DP22532 72 aa4.58□□□□□ -1.68
SCNN1A-221ENST00000543768 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
SCNN1A-221ENST00000543768 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
SCNN1A-221ENST00000543768 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.7
SCNN1A-221ENST00000543768 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.71
SCNN1A-221ENST00000543768 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
SCNN1A-221ENST00000543768 PRM1P04553 51 aa4.32□□□□□ -1.72
SCNN1A-221ENST00000543768 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
SCNN1A-221ENST00000543768 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
SCNN1A-221ENST00000543768 MT3P25713 68 aa4.26□□□□□ -1.73
SCNN1A-221ENST00000543768 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
SCNN1A-221ENST00000543768 KRTAP4-6Q9BYQ5 205 aa4.08□□□□□ -1.76
SCNN1A-221ENST00000543768 MT4P47944 62 aa4.03□□□□□ -1.76
SCNN1A-221ENST00000543768 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
SCNN1A-221ENST00000543768 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
SCNN1A-221ENST00000543768 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
SCNN1A-221ENST00000543768 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
SCNN1A-221ENST00000543768 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
SCNN1A-221ENST00000543768 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
SCNN1A-221ENST00000543768 KRTAP5-3Q6L8H2 238 aa3.82□□□□□ -1.8
SCNN1A-221ENST00000543768 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
SCNN1A-221ENST00000543768 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.84
SCNN1A-221ENST00000543768 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
SCNN1A-221ENST00000543768 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
SCNN1A-221ENST00000543768 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
SCNN1A-221ENST00000543768 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
SCNN1A-221ENST00000543768 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
SCNN1A-221ENST00000543768 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
SCNN1A-221ENST00000543768 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
SCNN1A-221ENST00000543768 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
SCNN1A-221ENST00000543768 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
SCNN1A-221ENST00000543768 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
SCNN1A-221ENST00000543768 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
SCNN1A-221ENST00000543768 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
SCNN1A-221ENST00000543768 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
SCNN1A-221ENST00000543768 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
SCNN1A-221ENST00000543768 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
SCNN1A-221ENST00000543768 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
SCNN1A-221ENST00000543768 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
SCNN1A-221ENST00000543768 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
SCNN1A-221ENST00000543768 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
SCNN1A-221ENST00000543768 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.97
SCNN1A-221ENST00000543768 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
SCNN1A-221ENST00000543768 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
SCNN1A-221ENST00000543768 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 188.5 ms