RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 LINC01558Q9Y6Z2 57 aa4.86□□□□□ -1.63
TNFRSF1A-215ENST00000543359 PSPHP1O15172 72 aa4.85□□□□□ -1.63
TNFRSF1A-215ENST00000543359 SPINT4Q6UDR6 99 aa4.85□□□□□ -1.63
TNFRSF1A-215ENST00000543359 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
TNFRSF1A-215ENST00000543359 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
TNFRSF1A-215ENST00000543359 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
TNFRSF1A-215ENST00000543359 BRK1Q8WUW1 75 aa4.81□□□□□ -1.64
TNFRSF1A-215ENST00000543359 PRR15LQ9BU68 103 aa4.81□□□□□ -1.64
TNFRSF1A-215ENST00000543359 KRTAP4-2Q9BYR5 136 aa4.81□□□□□ -1.64
TNFRSF1A-215ENST00000543359 KRTAP19-5Q3LI72 72 aa4.79□□□□□ -1.64
TNFRSF1A-215ENST00000543359 A0A1B0GU69 56 aa4.76□□□□□ -1.65
TNFRSF1A-215ENST00000543359 A8MU10 97 aa4.75□□□□□ -1.65
TNFRSF1A-215ENST00000543359 MT1GP13640 62 aa4.73□□□□□ -1.65
TNFRSF1A-215ENST00000543359 A6NED7 52 aa4.7□□□□□ -1.66
TNFRSF1A-215ENST00000543359 C10orf95Q9H7T3 257 aa4.7□□□□□ -1.66
TNFRSF1A-215ENST00000543359 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
TNFRSF1A-215ENST00000543359 MT1LQ93083 61 aa4.68□□□□□ -1.66
TNFRSF1A-215ENST00000543359 MT1MQ8N339 61 aa4.66□□□□□ -1.66
TNFRSF1A-215ENST00000543359 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
TNFRSF1A-215ENST00000543359 GPR98Q8WXG9 6306 aa4.63□□□□□ -1.67
TNFRSF1A-215ENST00000543359 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
TNFRSF1A-215ENST00000543359 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
TNFRSF1A-215ENST00000543359 TNP1P09430 55 aa4.6□□□□□ -1.67
TNFRSF1A-215ENST00000543359 HMCN1Q96RW7 5635 aa4.58□□□□□ -1.68
TNFRSF1A-215ENST00000543359 UQCR11O14957 56 aa4.57□□□□□ -1.68
TNFRSF1A-215ENST00000543359 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
TNFRSF1A-215ENST00000543359 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
TNFRSF1A-215ENST00000543359 MIR22HGQ0VDD5 57 aa4.54□□□□□ -1.68
TNFRSF1A-215ENST00000543359 KRTAP5-4Q6L8H1 288 aa4.5□□□□□ -1.69
TNFRSF1A-215ENST00000543359 MT4P47944 62 aa4.48□□□□□ -1.69
TNFRSF1A-215ENST00000543359 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
TNFRSF1A-215ENST00000543359 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
TNFRSF1A-215ENST00000543359 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
TNFRSF1A-215ENST00000543359 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.71
TNFRSF1A-215ENST00000543359 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
TNFRSF1A-215ENST00000543359 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
TNFRSF1A-215ENST00000543359 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
TNFRSF1A-215ENST00000543359 K7ERS5 55 aa4.26□□□□□ -1.73
TNFRSF1A-215ENST00000543359 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
TNFRSF1A-215ENST00000543359 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
TNFRSF1A-215ENST00000543359 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
TNFRSF1A-215ENST00000543359 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
TNFRSF1A-215ENST00000543359 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
TNFRSF1A-215ENST00000543359 ROMO1P60602 79 aa4.17□□□□□ -1.74
TNFRSF1A-215ENST00000543359 KRTAP12-4P60329 112 aa4.13□□□□□ -1.75
TNFRSF1A-215ENST00000543359 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
TNFRSF1A-215ENST00000543359 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
TNFRSF1A-215ENST00000543359 MT1AP04731 61 aa3.96□□□□□ -1.78
TNFRSF1A-215ENST00000543359 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.78
TNFRSF1A-215ENST00000543359 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
TNFRSF1A-215ENST00000543359 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
TNFRSF1A-215ENST00000543359 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
TNFRSF1A-215ENST00000543359 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
TNFRSF1A-215ENST00000543359 MUC5BQ9HC84 5762 aaPredicted RBP3.67□□□□□ -1.82
TNFRSF1A-215ENST00000543359 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
TNFRSF1A-215ENST00000543359 AHNAKQ09666 5890 aaKnown RBP3.62□□□□□ -1.83
TNFRSF1A-215ENST00000543359 MT3P25713 68 aa3.61□□□□□ -1.83
TNFRSF1A-215ENST00000543359 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
TNFRSF1A-215ENST00000543359 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
TNFRSF1A-215ENST00000543359 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
TNFRSF1A-215ENST00000543359 A0A0A0MQY5 61 aa3.48□□□□□ -1.85
TNFRSF1A-215ENST00000543359 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
TNFRSF1A-215ENST00000543359 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
TNFRSF1A-215ENST00000543359 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
TNFRSF1A-215ENST00000543359 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
TNFRSF1A-215ENST00000543359 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
TNFRSF1A-215ENST00000543359 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
TNFRSF1A-215ENST00000543359 LCE1FQ5T754 118 aa3□□□□□ -1.93
TNFRSF1A-215ENST00000543359 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
TNFRSF1A-215ENST00000543359 INE1O15225 51 aa2.92□□□□□ -1.94
TNFRSF1A-215ENST00000543359 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
TNFRSF1A-215ENST00000543359 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
TNFRSF1A-215ENST00000543359 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
TNFRSF1A-215ENST00000543359 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
TNFRSF1A-215ENST00000543359 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
TNFRSF1A-215ENST00000543359 PRM1P04553 51 aa2.18□□□□□ -2.06
TNFRSF1A-215ENST00000543359 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
TNFRSF1A-215ENST00000543359 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 95.1 ms