RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 KRTAP12-3P60328 96 aa8.46□□□□□ -1.06
HOMER3-205ENST00000542541 LCE1AQ5T7P2 110 aa8.44□□□□□ -1.06
HOMER3-205ENST00000542541 KTN1-AS1Q86SY8 53 aa8.39□□□□□ -1.07
HOMER3-205ENST00000542541 KRTAP19-3Q7Z4W3 81 aa8.31□□□□□ -1.08
HOMER3-205ENST00000542541 MT1LQ93083 61 aa8.25□□□□□ -1.09
HOMER3-205ENST00000542541 MT1GP13640 62 aa8.22□□□□□ -1.09
HOMER3-205ENST00000542541 LCE5AQ5TCM9 118 aa8.22□□□□□ -1.09
HOMER3-205ENST00000542541 SPRR2DP22532 72 aa8.18□□□□□ -1.1
HOMER3-205ENST00000542541 KRTAP15-1Q3LI76 137 aa8.14□□□□□ -1.11
HOMER3-205ENST00000542541 KRTAP20-1Q3LI63 56 aa8.12□□□□□ -1.11
HOMER3-205ENST00000542541 PRAC1Q96KF2 57 aa8.09□□□□□ -1.11
HOMER3-205ENST00000542541 KRTAP19-4Q3LI73 84 aa8.08□□□□□ -1.12
HOMER3-205ENST00000542541 MT1MQ8N339 61 aa8.04□□□□□ -1.12
HOMER3-205ENST00000542541 KRTAP2-3P0C7H8 128 aa8.03□□□□□ -1.12
HOMER3-205ENST00000542541 KRTAP2-4Q9BYR9 128 aa8.03□□□□□ -1.12
HOMER3-205ENST00000542541 LCE3BQ5TA77 95 aa7.89□□□□□ -1.15
HOMER3-205ENST00000542541 LCE3CQ5T5A8 94 aa7.85□□□□□ -1.15
HOMER3-205ENST00000542541 KRTAP4-7Q9BYR0 210 aa7.85□□□□□ -1.15
HOMER3-205ENST00000542541 KRTAP2-2Q9BYT5 123 aa7.81□□□□□ -1.16
HOMER3-205ENST00000542541 KRTAP2-1Q9BYU5 128 aa7.81□□□□□ -1.16
HOMER3-205ENST00000542541 DSTQ03001 7570 aaKnown RBP7.8□□□□□ -1.16
HOMER3-205ENST00000542541 KRTAP4-3Q9BYR4 195 aa7.8□□□□□ -1.16
HOMER3-205ENST00000542541 LOC100996750A0A140TA64 210 aa7.41□□□□□ -1.22
HOMER3-205ENST00000542541 KRTAP9-6A8MVA2 160 aa7.33□□□□□ -1.24
HOMER3-205ENST00000542541 KRTAP5-5Q701N2 237 aaPredicted RBP7.29□□□□□ -1.24
HOMER3-205ENST00000542541 LCE4AQ5TA78 99 aa7.28□□□□□ -1.24
HOMER3-205ENST00000542541 KRTAP5-4Q6L8H1 288 aa7.25□□□□□ -1.25
HOMER3-205ENST00000542541 SPRR5A0A1B0GTR4 108 aa7.23□□□□□ -1.25
HOMER3-205ENST00000542541 KRTAP4-9Q9BYQ8 210 aa7.23□□□□□ -1.25
HOMER3-205ENST00000542541 LCE1DQ5T752 114 aa7.13□□□□□ -1.27
HOMER3-205ENST00000542541 MT4P47944 62 aa7.09□□□□□ -1.27
HOMER3-205ENST00000542541 MT1AP04731 61 aa7.05□□□□□ -1.28
HOMER3-205ENST00000542541 HMCN1Q96RW7 5635 aa7.03□□□□□ -1.28
HOMER3-205ENST00000542541 KRTAP12-4P60329 112 aa7□□□□□ -1.29
HOMER3-205ENST00000542541 KRTAP4-6Q9BYQ5 205 aa7□□□□□ -1.29
HOMER3-205ENST00000542541 KRTAP6-1Q3LI64 71 aa6.94□□□□□ -1.3
HOMER3-205ENST00000542541 SYNE1Q8NF91 8797 aaKnown RBP6.86□□□□□ -1.31
HOMER3-205ENST00000542541 KRTAP20-2Q3LI61 65 aa6.8□□□□□ -1.32
HOMER3-205ENST00000542541 LUZP6Q538Z0 58 aa6.79□□□□□ -1.32
HOMER3-205ENST00000542541 KRTAP9-4Q9BYQ2 154 aa6.74□□□□□ -1.33
HOMER3-205ENST00000542541 KRTAP5-3Q6L8H2 238 aa6.61□□□□□ -1.35
HOMER3-205ENST00000542541 AHNAK2Q8IVF2 5795 aa6.6□□□□□ -1.35
HOMER3-205ENST00000542541 GPR98Q8WXG9 6306 aa6.57□□□□□ -1.36
HOMER3-205ENST00000542541 NDUFAF8A1L188 74 aa6.54□□□□□ -1.36
HOMER3-205ENST00000542541 KRTAP6-2Q3LI66 62 aa6.5□□□□□ -1.37
HOMER3-205ENST00000542541 KRTAP5-2Q701N4 177 aa6.47□□□□□ -1.37
HOMER3-205ENST00000542541 MT3P25713 68 aa6.44□□□□□ -1.38
HOMER3-205ENST00000542541 KRTAP5-10Q6L8G5 202 aa6.39□□□□□ -1.39
HOMER3-205ENST00000542541 H3BS24 57 aa6.07□□□□□ -1.44
HOMER3-205ENST00000542541 KRTAP4-11Q9BYQ6 195 aa6.06□□□□□ -1.44
HOMER3-205ENST00000542541 KRTAP5-7Q6L8G8 165 aa6.05□□□□□ -1.44
HOMER3-205ENST00000542541 OBSCNQ5VST9 7968 aa5.94□□□□□ -1.46
HOMER3-205ENST00000542541 KRTAP5-8O75690 187 aa5.88□□□□□ -1.47
HOMER3-205ENST00000542541 LCE3DQ9BYE3 92 aa5.82□□□□□ -1.48
HOMER3-205ENST00000542541 A0A0A0MQY5 61 aa5.79□□□□□ -1.48
HOMER3-205ENST00000542541 LCE1EQ5T753 118 aa5.74□□□□□ -1.49
HOMER3-205ENST00000542541 KRTAP5-1Q6L8H4 278 aa5.7□□□□□ -1.5
HOMER3-205ENST00000542541 LCE3EQ5T5B0 92 aa5.59□□□□□ -1.51
HOMER3-205ENST00000542541 MUC5ACP98088 5654 aa5.54□□□□□ -1.52
HOMER3-205ENST00000542541 INE1O15225 51 aa5.43□□□□□ -1.54
HOMER3-205ENST00000542541 KRTAP9-9Q9BYP9 154 aa5.42□□□□□ -1.54
HOMER3-205ENST00000542541 LCE1BQ5T7P3 118 aa5.34□□□□□ -1.56
HOMER3-205ENST00000542541 MUC5BQ9HC84 5762 aaPredicted RBP5.34□□□□□ -1.56
HOMER3-205ENST00000542541 LCE1CQ5T751 118 aa5.32□□□□□ -1.56
HOMER3-205ENST00000542541 KRTAP4-2Q9BYR5 136 aa5.3□□□□□ -1.56
HOMER3-205ENST00000542541 AHNAKQ09666 5890 aaKnown RBP5.24□□□□□ -1.57
HOMER3-205ENST00000542541 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.92□□□□□ -1.62
HOMER3-205ENST00000542541 KRTAP5-11Q6L8G4 156 aa4.74□□□□□ -1.65
HOMER3-205ENST00000542541 PRM1P04553 51 aa4.58□□□□□ -1.68
HOMER3-205ENST00000542541 KRTAP4-12Q9BQ66 201 aa4.57□□□□□ -1.68
HOMER3-205ENST00000542541 KRTAP21-2Q3LI59 83 aa4.56□□□□□ -1.68
HOMER3-205ENST00000542541 LCE1FQ5T754 118 aa4.46□□□□□ -1.69
HOMER3-205ENST00000542541 PHGR1C9JFL3 82 aa4.06□□□□□ -1.76
HOMER3-205ENST00000542541 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
HOMER3-205ENST00000542541 MUC19Q7Z5P9 8384 aa3.63□□□□□ -1.83
HOMER3-205ENST00000542541 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
HOMER3-205ENST00000542541 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 139 ms