RNA–Protein interactions for RNA: ENST00000542447.6

CADM1-212, Transcript of cell adhesion molecule 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CADM1, Length 4,223 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-212ENST00000542447 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
CADM1-212ENST00000542447 KRTAP9-6A0A140TA67 174 aa3.93□□□□□ -1.78
CADM1-212ENST00000542447 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
CADM1-212ENST00000542447 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
CADM1-212ENST00000542447 MT1GP13640 62 aa3.91□□□□□ -1.78
CADM1-212ENST00000542447 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
CADM1-212ENST00000542447 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
CADM1-212ENST00000542447 KRTAP2-1Q9BYU5 128 aa3.87□□□□□ -1.79
CADM1-212ENST00000542447 LCE3BQ5TA77 95 aa3.85□□□□□ -1.79
CADM1-212ENST00000542447 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.79
CADM1-212ENST00000542447 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
CADM1-212ENST00000542447 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
CADM1-212ENST00000542447 MT1LQ93083 61 aa3.77□□□□□ -1.81
CADM1-212ENST00000542447 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
CADM1-212ENST00000542447 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
CADM1-212ENST00000542447 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
CADM1-212ENST00000542447 MT1EP04732 61 aa3.7□□□□□ -1.82
CADM1-212ENST00000542447 KRTAP19-6Q3LI70 58 aa3.68□□□□□ -1.82
CADM1-212ENST00000542447 MUC12Q9UKN1 5478 aa3.68□□□□□ -1.82
CADM1-212ENST00000542447 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
CADM1-212ENST00000542447 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.67□□□□□ -1.82
CADM1-212ENST00000542447 KRTAP9-7A8MTY7 169 aa3.65□□□□□ -1.82
CADM1-212ENST00000542447 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.83
CADM1-212ENST00000542447 PRM1P04553 51 aa3.56□□□□□ -1.84
CADM1-212ENST00000542447 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
CADM1-212ENST00000542447 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
CADM1-212ENST00000542447 KRTAP9-4Q9BYQ2 154 aa3.51□□□□□ -1.85
CADM1-212ENST00000542447 MDN1Q9NU22 5596 aa3.5□□□□□ -1.85
CADM1-212ENST00000542447 MT1MQ8N339 61 aa3.5□□□□□ -1.85
CADM1-212ENST00000542447 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
CADM1-212ENST00000542447 KRTAP19-3Q7Z4W3 81 aa3.48□□□□□ -1.85
CADM1-212ENST00000542447 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
CADM1-212ENST00000542447 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
CADM1-212ENST00000542447 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
CADM1-212ENST00000542447 SPRR2EP22531 72 aa3.34□□□□□ -1.87
CADM1-212ENST00000542447 SPRR2BP35325 72 aa3.34□□□□□ -1.87
CADM1-212ENST00000542447 SPRR2AP35326 72 aa3.34□□□□□ -1.87
CADM1-212ENST00000542447 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
CADM1-212ENST00000542447 NEBP20929 6669 aa3.28□□□□□ -1.88
CADM1-212ENST00000542447 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
CADM1-212ENST00000542447 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
CADM1-212ENST00000542447 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
CADM1-212ENST00000542447 SPRR2DP22532 72 aa3.21□□□□□ -1.9
CADM1-212ENST00000542447 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
CADM1-212ENST00000542447 MT1AP04731 61 aa3.17□□□□□ -1.9
CADM1-212ENST00000542447 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
CADM1-212ENST00000542447 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
CADM1-212ENST00000542447 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
CADM1-212ENST00000542447 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
CADM1-212ENST00000542447 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
CADM1-212ENST00000542447 MT3P25713 68 aa3□□□□□ -1.93
CADM1-212ENST00000542447 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
CADM1-212ENST00000542447 MT4P47944 62 aa2.92□□□□□ -1.94
CADM1-212ENST00000542447 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
CADM1-212ENST00000542447 HMCN1Q96RW7 5635 aa2.78□□□□□ -1.96
CADM1-212ENST00000542447 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
CADM1-212ENST00000542447 KRTAP5-3Q6L8H2 238 aa2.62□□□□□ -1.99
CADM1-212ENST00000542447 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
CADM1-212ENST00000542447 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
CADM1-212ENST00000542447 LCE1FQ5T754 118 aa2.54□□□□□ -2
CADM1-212ENST00000542447 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
CADM1-212ENST00000542447 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
CADM1-212ENST00000542447 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
CADM1-212ENST00000542447 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
CADM1-212ENST00000542447 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
CADM1-212ENST00000542447 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
CADM1-212ENST00000542447 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
CADM1-212ENST00000542447 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
CADM1-212ENST00000542447 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
CADM1-212ENST00000542447 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
CADM1-212ENST00000542447 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
CADM1-212ENST00000542447 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
CADM1-212ENST00000542447 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
CADM1-212ENST00000542447 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
CADM1-212ENST00000542447 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
CADM1-212ENST00000542447 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
CADM1-212ENST00000542447 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 114.1 ms