RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 ORMDL3Q8N138 153 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 TTTY13Q9BZ97 58 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 PRO1854Q9UHT4 67 aa0.36□□□□□ -2.35
TRAV1-1-201ENST00000542354 TRAV7A0A075B6U4 112 aa0.35□□□□□ -2.35
TRAV1-1-201ENST00000542354 TRBV7-4A0A0J9YYF1 115 aa0.35□□□□□ -2.35
TRAV1-1-201ENST00000542354 C11orf86A6NJI1 115 aa0.35□□□□□ -2.35
TRAV1-1-201ENST00000542354 TIMM17BO60830 172 aa0.35□□□□□ -2.35
TRAV1-1-201ENST00000542354 NDUFB1O75438 58 aa0.35□□□□□ -2.35
TRAV1-1-201ENST00000542354 ATP5EP56381 51 aaPredicted RBP0.35□□□□□ -2.35
TRAV1-1-201ENST00000542354 TSPEAR-AS2P59090 65 aa0.35□□□□□ -2.35
TRAV1-1-201ENST00000542354 ATXN8Q156A1 80 aa0.35□□□□□ -2.35
TRAV1-1-201ENST00000542354 Q1T7F1 81 aa0.35□□□□□ -2.35
TRAV1-1-201ENST00000542354 ATP5EP2Q5VTU8 51 aa0.35□□□□□ -2.35
TRAV1-1-201ENST00000542354 KTN1-AS1Q86SY8 53 aa0.35□□□□□ -2.35
TRAV1-1-201ENST00000542354 BRK1Q8WUW1 75 aa0.35□□□□□ -2.35
TRAV1-1-201ENST00000542354 COPS9Q8WXC6 57 aa0.35□□□□□ -2.35
TRAV1-1-201ENST00000542354 TOMM6Q96B49 74 aa0.35□□□□□ -2.35
TRAV1-1-201ENST00000542354 HIST1H4GQ99525 98 aa0.35□□□□□ -2.35
TRAV1-1-201ENST00000542354 TRAV22A0A0B4J277 110 aa0.34□□□□□ -2.36
TRAV1-1-201ENST00000542354 LOC101927531A0A1B0GV80 90 aa0.34□□□□□ -2.36
TRAV1-1-201ENST00000542354 TMEM256-PLSCR3K7ERE1 68 aa0.34□□□□□ -2.36
TRAV1-1-201ENST00000542354 LEPROTO15243 131 aa0.34□□□□□ -2.36
TRAV1-1-201ENST00000542354 NDUFS5O43920 106 aa0.34□□□□□ -2.36
TRAV1-1-201ENST00000542354 COX6CP09669 75 aa0.34□□□□□ -2.36
TRAV1-1-201ENST00000542354 BAALC-AS2P0C853 105 aa0.34□□□□□ -2.36
TRAV1-1-201ENST00000542354 SCGB1D4Q6XE38 83 aa0.34□□□□□ -2.36
TRAV1-1-201ENST00000542354 Q6ZQY7 126 aa0.34□□□□□ -2.36
TRAV1-1-201ENST00000542354 CYP4F30PQ9H0H9 118 aa0.34□□□□□ -2.36
TRAV1-1-201ENST00000542354 H0YGX0 51 aa0.33□□□□□ -2.36
TRAV1-1-201ENST00000542354 DNAL4O96015 105 aa0.33□□□□□ -2.36
TRAV1-1-201ENST00000542354 Q6ZQT0 140 aa0.33□□□□□ -2.36
TRAV1-1-201ENST00000542354 TMEM254Q8TBM7 123 aa0.33□□□□□ -2.36
TRAV1-1-201ENST00000542354 LINC00308Q8TCZ7 52 aa0.33□□□□□ -2.36
TRAV1-1-201ENST00000542354 C8orf17Q9NRJ1 99 aa0.33□□□□□ -2.36
TRAV1-1-201ENST00000542354 CDC42SE1Q9NRR8 79 aa0.33□□□□□ -2.36
TRAV1-1-201ENST00000542354 SNURFQ9Y675 71 aa0.33□□□□□ -2.36
TRAV1-1-201ENST00000542354 JMJD7-PLA2G4BH0Y9G9 81 aa0.32□□□□□ -2.36
TRAV1-1-201ENST00000542354 CHKB-CPT1BH3BT56 60 aa0.32□□□□□ -2.36
TRAV1-1-201ENST00000542354 BPY2O14599 106 aa0.32□□□□□ -2.36
TRAV1-1-201ENST00000542354 PSPHP1O15172 72 aa0.32□□□□□ -2.36
TRAV1-1-201ENST00000542354 MP68P56378 58 aa0.32□□□□□ -2.36
TRAV1-1-201ENST00000542354 NREPQ16612 68 aa0.32□□□□□ -2.36
TRAV1-1-201ENST00000542354 KRTAP25-1Q3LHN0 102 aa0.32□□□□□ -2.36
TRAV1-1-201ENST00000542354 SPINT4Q6UDR6 99 aa0.32□□□□□ -2.36
TRAV1-1-201ENST00000542354 SPANXA2-OT1Q8N9U9 137 aa0.32□□□□□ -2.36
TRAV1-1-201ENST00000542354 SMIM11BQ8TCY0 68 aa0.32□□□□□ -2.36
TRAV1-1-201ENST00000542354 MRPL34Q9BQ48 92 aaKnown RBP0.32□□□□□ -2.36
TRAV1-1-201ENST00000542354 UBL5Q9BZL1 73 aa0.32□□□□□ -2.36
TRAV1-1-201ENST00000542354 C14orf132Q9NPU4 83 aa0.32□□□□□ -2.36
TRAV1-1-201ENST00000542354 LINC01558Q9Y6Z2 57 aa0.32□□□□□ -2.36
TRAV1-1-201ENST00000542354 A0A1B0GW54 56 aa0.31□□□□□ -2.36
TRAV1-1-201ENST00000542354 A6NED7 52 aa0.31□□□□□ -2.36
TRAV1-1-201ENST00000542354 H3BPC8 53 aa0.31□□□□□ -2.36
TRAV1-1-201ENST00000542354 H3BQ85 93 aa0.31□□□□□ -2.36
TRAV1-1-201ENST00000542354 ROMO1P60602 79 aa0.31□□□□□ -2.36
TRAV1-1-201ENST00000542354 CASC2Q6XLA1 102 aa0.31□□□□□ -2.36
TRAV1-1-201ENST00000542354 SPTSSBQ8NFR3 76 aa0.31□□□□□ -2.36
TRAV1-1-201ENST00000542354 LINC00208Q96KT6 92 aa0.31□□□□□ -2.36
TRAV1-1-201ENST00000542354 PRR15LQ9BU68 103 aa0.31□□□□□ -2.36
TRAV1-1-201ENST00000542354 ORMDL1Q9P0S3 153 aa0.31□□□□□ -2.36
TRAV1-1-201ENST00000542354 H0Y9P7 68 aa0.3□□□□□ -2.36
TRAV1-1-201ENST00000542354 SPATA8Q6RVD6 105 aa0.3□□□□□ -2.36
TRAV1-1-201ENST00000542354 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.3□□□□□ -2.36
TRAV1-1-201ENST00000542354 COA5Q86WW8 74 aa0.3□□□□□ -2.36
TRAV1-1-201ENST00000542354 MIR22HGQ0VDD5 57 aa0.29□□□□□ -2.36
TRAV1-1-201ENST00000542354 MMP24-AS1A0A0U1RRL7 71 aa0.28□□□□□ -2.36
TRAV1-1-201ENST00000542354 UQCR11O14957 56 aa0.28□□□□□ -2.36
TRAV1-1-201ENST00000542354 DMAC1Q96GE9 116 aa0.28□□□□□ -2.36
TRAV1-1-201ENST00000542354 TP53AIP1Q9HCN2 124 aa0.28□□□□□ -2.36
TRAV1-1-201ENST00000542354 A0A1B0GU69 56 aa0.27□□□□□ -2.37
TRAV1-1-201ENST00000542354 K7ERS5 55 aa0.27□□□□□ -2.37
TRAV1-1-201ENST00000542354 ACYP2P14621 99 aa0.27□□□□□ -2.37
TRAV1-1-201ENST00000542354 LUZP6Q538Z0 58 aa0.27□□□□□ -2.37
TRAV1-1-201ENST00000542354 A0A1B0GU33 70 aa0.26□□□□□ -2.37
TRAV1-1-201ENST00000542354 TNP1P09430 55 aa0.25□□□□□ -2.37
TRAV1-1-201ENST00000542354 INE1O15225 51 aa0.23□□□□□ -2.37
TRAV1-1-201ENST00000542354 PRM1P04553 51 aa0.14□□□□□ -2.39
Retrieved 77 of 20,778 RNA–protein pairs in 9 ms