RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
KDM3A-216ENST00000542128 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
KDM3A-216ENST00000542128 MT1GP13640 62 aa4.21□□□□□ -1.74
KDM3A-216ENST00000542128 KMT2DO14686 5537 aa4.18□□□□□ -1.74
KDM3A-216ENST00000542128 KRTAP19-6Q3LI70 58 aa4.18□□□□□ -1.74
KDM3A-216ENST00000542128 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
KDM3A-216ENST00000542128 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.75
KDM3A-216ENST00000542128 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
KDM3A-216ENST00000542128 LCE3BQ5TA77 95 aa4.07□□□□□ -1.76
KDM3A-216ENST00000542128 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
KDM3A-216ENST00000542128 KRTAP2-3P0C7H8 128 aa4.06□□□□□ -1.76
KDM3A-216ENST00000542128 KRTAP2-4Q9BYR9 128 aa4.06□□□□□ -1.76
KDM3A-216ENST00000542128 KRTAP2-1Q9BYU5 128 aa4.06□□□□□ -1.76
KDM3A-216ENST00000542128 FCGBPQ9Y6R7 5405 aaPredicted RBP4.02□□□□□ -1.77
KDM3A-216ENST00000542128 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
KDM3A-216ENST00000542128 MT1EP04732 61 aa3.98□□□□□ -1.77
KDM3A-216ENST00000542128 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
KDM3A-216ENST00000542128 MT1LQ93083 61 aa3.95□□□□□ -1.78
KDM3A-216ENST00000542128 PRM1P04553 51 aa3.94□□□□□ -1.78
KDM3A-216ENST00000542128 MT4P47944 62 aa3.94□□□□□ -1.78
KDM3A-216ENST00000542128 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
KDM3A-216ENST00000542128 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.9□□□□□ -1.78
KDM3A-216ENST00000542128 SSPOA2VEC9 5147 aa3.9□□□□□ -1.79
KDM3A-216ENST00000542128 MACF1Q9UPN3 7388 aaKnown RBP3.87□□□□□ -1.79
KDM3A-216ENST00000542128 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
KDM3A-216ENST00000542128 MT1MQ8N339 61 aa3.86□□□□□ -1.79
KDM3A-216ENST00000542128 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
KDM3A-216ENST00000542128 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.79
KDM3A-216ENST00000542128 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
KDM3A-216ENST00000542128 LOC100996750A0A140TA64 210 aa3.78□□□□□ -1.8
KDM3A-216ENST00000542128 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
KDM3A-216ENST00000542128 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
KDM3A-216ENST00000542128 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
KDM3A-216ENST00000542128 MT3P25713 68 aa3.67□□□□□ -1.82
KDM3A-216ENST00000542128 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
KDM3A-216ENST00000542128 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
KDM3A-216ENST00000542128 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
KDM3A-216ENST00000542128 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
KDM3A-216ENST00000542128 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
KDM3A-216ENST00000542128 MT1AP04731 61 aa3.51□□□□□ -1.85
KDM3A-216ENST00000542128 NEBP20929 6669 aa3.5□□□□□ -1.85
KDM3A-216ENST00000542128 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
KDM3A-216ENST00000542128 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
KDM3A-216ENST00000542128 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
KDM3A-216ENST00000542128 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
KDM3A-216ENST00000542128 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
KDM3A-216ENST00000542128 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
KDM3A-216ENST00000542128 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
KDM3A-216ENST00000542128 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
KDM3A-216ENST00000542128 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
KDM3A-216ENST00000542128 KRTAP4-6Q9BYQ5 205 aa3.08□□□□□ -1.92
KDM3A-216ENST00000542128 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
KDM3A-216ENST00000542128 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
KDM3A-216ENST00000542128 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
KDM3A-216ENST00000542128 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
KDM3A-216ENST00000542128 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
KDM3A-216ENST00000542128 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
KDM3A-216ENST00000542128 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
KDM3A-216ENST00000542128 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
KDM3A-216ENST00000542128 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
KDM3A-216ENST00000542128 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
KDM3A-216ENST00000542128 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
KDM3A-216ENST00000542128 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
KDM3A-216ENST00000542128 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
KDM3A-216ENST00000542128 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
KDM3A-216ENST00000542128 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
KDM3A-216ENST00000542128 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
KDM3A-216ENST00000542128 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
KDM3A-216ENST00000542128 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
KDM3A-216ENST00000542128 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.08
KDM3A-216ENST00000542128 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
KDM3A-216ENST00000542128 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
KDM3A-216ENST00000542128 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
KDM3A-216ENST00000542128 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.1
KDM3A-216ENST00000542128 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
KDM3A-216ENST00000542128 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
KDM3A-216ENST00000542128 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 50.2 ms