RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 OBSCNQ5VST9 7968 aa5.68□□□□□ -1.5
PDCD2-208ENST00000541970 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
PDCD2-208ENST00000541970 KRTAP4-3Q9BYR4 195 aa5.63□□□□□ -1.51
PDCD2-208ENST00000541970 MT1EP04732 61 aa5.62□□□□□ -1.51
PDCD2-208ENST00000541970 MT1LQ93083 61 aa5.61□□□□□ -1.51
PDCD2-208ENST00000541970 SPRR2FQ96RM1 72 aa5.57□□□□□ -1.52
PDCD2-208ENST00000541970 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
PDCD2-208ENST00000541970 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
PDCD2-208ENST00000541970 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
PDCD2-208ENST00000541970 MT1GP13640 62 aa5.53□□□□□ -1.52
PDCD2-208ENST00000541970 MACF1Q9UPN3 7388 aaKnown RBP5.52□□□□□ -1.53
PDCD2-208ENST00000541970 SYNE2Q8WXH0 6885 aaKnown RBP5.49□□□□□ -1.53
PDCD2-208ENST00000541970 LCE2DQ5TA82 110 aaPredicted RBP5.38□□□□□ -1.55
PDCD2-208ENST00000541970 KRTAP19-3Q7Z4W3 81 aa5.33□□□□□ -1.56
PDCD2-208ENST00000541970 MT1MQ8N339 61 aa5.3□□□□□ -1.56
PDCD2-208ENST00000541970 MDN1Q9NU22 5596 aa5.28□□□□□ -1.56
PDCD2-208ENST00000541970 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
PDCD2-208ENST00000541970 LCE3BQ5TA77 95 aa5.21□□□□□ -1.57
PDCD2-208ENST00000541970 KRTAP9-2Q9BYQ4 174 aa5.21□□□□□ -1.57
PDCD2-208ENST00000541970 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
PDCD2-208ENST00000541970 SPRR2EP22531 72 aa5.06□□□□□ -1.6
PDCD2-208ENST00000541970 SPRR2BP35325 72 aa5.06□□□□□ -1.6
PDCD2-208ENST00000541970 SPRR2AP35326 72 aa5.06□□□□□ -1.6
PDCD2-208ENST00000541970 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
PDCD2-208ENST00000541970 KRTAP9-7A8MTY7 169 aa4.98□□□□□ -1.61
PDCD2-208ENST00000541970 PRM1P04553 51 aa4.98□□□□□ -1.61
PDCD2-208ENST00000541970 LCE3DQ9BYE3 92 aa4.89□□□□□ -1.63
PDCD2-208ENST00000541970 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
PDCD2-208ENST00000541970 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
PDCD2-208ENST00000541970 LCE3EQ5T5B0 92 aa4.84□□□□□ -1.63
PDCD2-208ENST00000541970 SPRR2DP22532 72 aa4.81□□□□□ -1.64
PDCD2-208ENST00000541970 KRTAP5-5Q701N2 237 aaPredicted RBP4.71□□□□□ -1.66
PDCD2-208ENST00000541970 MT1AP04731 61 aa4.65□□□□□ -1.66
PDCD2-208ENST00000541970 KRTAP5-9P26371 169 aa4.62□□□□□ -1.67
PDCD2-208ENST00000541970 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.62□□□□□ -1.67
PDCD2-208ENST00000541970 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
PDCD2-208ENST00000541970 KRTAP9-6A0A140TA67 174 aa4.56□□□□□ -1.68
PDCD2-208ENST00000541970 KRTAP6-3Q3LI67 103 aa4.53□□□□□ -1.68
PDCD2-208ENST00000541970 MT4P47944 62 aa4.46□□□□□ -1.7
PDCD2-208ENST00000541970 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
PDCD2-208ENST00000541970 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
PDCD2-208ENST00000541970 MT3P25713 68 aa4.31□□□□□ -1.72
PDCD2-208ENST00000541970 KRTAP4-6Q9BYQ5 205 aa4.24□□□□□ -1.73
PDCD2-208ENST00000541970 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
PDCD2-208ENST00000541970 NEBP20929 6669 aa4.21□□□□□ -1.74
PDCD2-208ENST00000541970 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
PDCD2-208ENST00000541970 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
PDCD2-208ENST00000541970 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
PDCD2-208ENST00000541970 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
PDCD2-208ENST00000541970 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
PDCD2-208ENST00000541970 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
PDCD2-208ENST00000541970 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
PDCD2-208ENST00000541970 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
PDCD2-208ENST00000541970 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
PDCD2-208ENST00000541970 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
PDCD2-208ENST00000541970 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
PDCD2-208ENST00000541970 KRTAP5-3Q6L8H2 238 aa3.55□□□□□ -1.84
PDCD2-208ENST00000541970 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
PDCD2-208ENST00000541970 AHNAK2Q8IVF2 5795 aa3.28□□□□□ -1.89
PDCD2-208ENST00000541970 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
PDCD2-208ENST00000541970 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
PDCD2-208ENST00000541970 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
PDCD2-208ENST00000541970 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
PDCD2-208ENST00000541970 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
PDCD2-208ENST00000541970 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
PDCD2-208ENST00000541970 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
PDCD2-208ENST00000541970 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
PDCD2-208ENST00000541970 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
PDCD2-208ENST00000541970 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
PDCD2-208ENST00000541970 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
PDCD2-208ENST00000541970 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
PDCD2-208ENST00000541970 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
PDCD2-208ENST00000541970 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
PDCD2-208ENST00000541970 KRTAP5-7Q6L8G8 165 aa2.65□□□□□ -1.98
PDCD2-208ENST00000541970 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
PDCD2-208ENST00000541970 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
PDCD2-208ENST00000541970 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 80.3 ms