RNA–Protein interactions for RNA: ENST00000541944.5

PHKA1-205, Transcript of phosphorylase kinase regulatory subunit alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHKA1, Length 5,944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1-205ENST00000541944 SYNE1Q8NF91 8797 aaKnown RBP5.15□□□□□ -1.58
PHKA1-205ENST00000541944 KRTAP4-3Q9BYR4 195 aa5.14□□□□□ -1.59
PHKA1-205ENST00000541944 MT3P25713 68 aa5.14□□□□□ -1.59
PHKA1-205ENST00000541944 KRTAP19-7Q3SYF9 63 aa5.07□□□□□ -1.6
PHKA1-205ENST00000541944 PRM1P04553 51 aa5.06□□□□□ -1.6
PHKA1-205ENST00000541944 FSIP2Q5CZC0 6907 aa5.06□□□□□ -1.6
PHKA1-205ENST00000541944 FAT4Q6V0I7 4981 aa5.03□□□□□ -1.6
PHKA1-205ENST00000541944 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
PHKA1-205ENST00000541944 RNF213Q63HN8 5207 aa5.02□□□□□ -1.61
PHKA1-205ENST00000541944 MT4P47944 62 aa5.02□□□□□ -1.61
PHKA1-205ENST00000541944 LCE2AQ5TA79 106 aaPredicted RBP4.99□□□□□ -1.61
PHKA1-205ENST00000541944 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
PHKA1-205ENST00000541944 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
PHKA1-205ENST00000541944 MT1AP04731 61 aa4.91□□□□□ -1.62
PHKA1-205ENST00000541944 KRTAP2-3P0C7H8 128 aa4.89□□□□□ -1.63
PHKA1-205ENST00000541944 KRTAP2-4Q9BYR9 128 aa4.89□□□□□ -1.63
PHKA1-205ENST00000541944 KRTAP2-1Q9BYU5 128 aa4.89□□□□□ -1.63
PHKA1-205ENST00000541944 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
PHKA1-205ENST00000541944 LCE1DQ5T752 114 aa4.85□□□□□ -1.63
PHKA1-205ENST00000541944 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
PHKA1-205ENST00000541944 MUC2Q02817 5179 aa4.79□□□□□ -1.64
PHKA1-205ENST00000541944 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
PHKA1-205ENST00000541944 SYNE2Q8WXH0 6885 aaKnown RBP4.69□□□□□ -1.66
PHKA1-205ENST00000541944 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
PHKA1-205ENST00000541944 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
PHKA1-205ENST00000541944 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
PHKA1-205ENST00000541944 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
PHKA1-205ENST00000541944 LCE5AQ5TCM9 118 aa4.57□□□□□ -1.68
PHKA1-205ENST00000541944 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
PHKA1-205ENST00000541944 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
PHKA1-205ENST00000541944 KRTAP6-3Q3LI67 103 aa4.48□□□□□ -1.69
PHKA1-205ENST00000541944 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
PHKA1-205ENST00000541944 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
PHKA1-205ENST00000541944 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
PHKA1-205ENST00000541944 USH2AO75445 5202 aa4.33□□□□□ -1.72
PHKA1-205ENST00000541944 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
PHKA1-205ENST00000541944 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
PHKA1-205ENST00000541944 KMT2DO14686 5537 aa4.26□□□□□ -1.73
PHKA1-205ENST00000541944 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
PHKA1-205ENST00000541944 DSTQ03001 7570 aaKnown RBP4.14□□□□□ -1.75
PHKA1-205ENST00000541944 LCE1CQ5T751 118 aa4.06□□□□□ -1.76
PHKA1-205ENST00000541944 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
PHKA1-205ENST00000541944 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
PHKA1-205ENST00000541944 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
PHKA1-205ENST00000541944 SSPOA2VEC9 5147 aa3.89□□□□□ -1.79
PHKA1-205ENST00000541944 KRTAP5-9P26371 169 aa3.88□□□□□ -1.79
PHKA1-205ENST00000541944 MUC12Q9UKN1 5478 aa3.84□□□□□ -1.79
PHKA1-205ENST00000541944 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
PHKA1-205ENST00000541944 NEBP20929 6669 aa3.76□□□□□ -1.81
PHKA1-205ENST00000541944 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
PHKA1-205ENST00000541944 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
PHKA1-205ENST00000541944 MUC19Q7Z5P9 8384 aa3.73□□□□□ -1.81
PHKA1-205ENST00000541944 KRTAP20-2Q3LI61 65 aa3.71□□□□□ -1.82
PHKA1-205ENST00000541944 MDN1Q9NU22 5596 aa3.65□□□□□ -1.83
PHKA1-205ENST00000541944 KRTAP5-5Q701N2 237 aaPredicted RBP3.49□□□□□ -1.85
PHKA1-205ENST00000541944 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
PHKA1-205ENST00000541944 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.86
PHKA1-205ENST00000541944 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.87
PHKA1-205ENST00000541944 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
PHKA1-205ENST00000541944 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
PHKA1-205ENST00000541944 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
PHKA1-205ENST00000541944 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
PHKA1-205ENST00000541944 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.94
PHKA1-205ENST00000541944 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
PHKA1-205ENST00000541944 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
PHKA1-205ENST00000541944 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
PHKA1-205ENST00000541944 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
PHKA1-205ENST00000541944 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
PHKA1-205ENST00000541944 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
PHKA1-205ENST00000541944 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
PHKA1-205ENST00000541944 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
PHKA1-205ENST00000541944 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
PHKA1-205ENST00000541944 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
PHKA1-205ENST00000541944 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
PHKA1-205ENST00000541944 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
PHKA1-205ENST00000541944 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
PHKA1-205ENST00000541944 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 81.9 ms