RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 RNF213Q63HN8 5207 aa2.99□□□□□ -1.93
FNDC3A-206ENST00000541916 UBR4Q5T4S7 5183 aa2.99□□□□□ -1.93
FNDC3A-206ENST00000541916 KRTAP2-3P0C7H8 128 aa2.96□□□□□ -1.94
FNDC3A-206ENST00000541916 KRTAP2-4Q9BYR9 128 aa2.96□□□□□ -1.94
FNDC3A-206ENST00000541916 FAT4Q6V0I7 4981 aa2.95□□□□□ -1.94
FNDC3A-206ENST00000541916 FSIP2Q5CZC0 6907 aa2.94□□□□□ -1.94
FNDC3A-206ENST00000541916 SYNE2Q8WXH0 6885 aaKnown RBP2.92□□□□□ -1.94
FNDC3A-206ENST00000541916 MT1EP04732 61 aa2.89□□□□□ -1.95
FNDC3A-206ENST00000541916 FLGP20930 4061 aaPredicted RBP2.88□□□□□ -1.95
FNDC3A-206ENST00000541916 HMCN2Q8NDA2 5059 aa2.86□□□□□ -1.95
FNDC3A-206ENST00000541916 MT1LQ93083 61 aa2.86□□□□□ -1.95
FNDC3A-206ENST00000541916 MT1MQ8N339 61 aa2.83□□□□□ -1.96
FNDC3A-206ENST00000541916 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
FNDC3A-206ENST00000541916 KRTAP2-1Q9BYU5 128 aa2.83□□□□□ -1.96
FNDC3A-206ENST00000541916 KRTAP4-7Q9BYR0 210 aa2.78□□□□□ -1.96
FNDC3A-206ENST00000541916 LCE1AQ5T7P2 110 aa2.77□□□□□ -1.97
FNDC3A-206ENST00000541916 MT3P25713 68 aa2.75□□□□□ -1.97
FNDC3A-206ENST00000541916 KRTAP4-9Q9BYQ8 210 aa2.74□□□□□ -1.97
FNDC3A-206ENST00000541916 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
FNDC3A-206ENST00000541916 KRTAP4-3Q9BYR4 195 aa2.7□□□□□ -1.98
FNDC3A-206ENST00000541916 MUC2Q02817 5179 aa2.7□□□□□ -1.98
FNDC3A-206ENST00000541916 LCE4AQ5TA78 99 aa2.7□□□□□ -1.98
FNDC3A-206ENST00000541916 LCE1DQ5T752 114 aa2.69□□□□□ -1.98
FNDC3A-206ENST00000541916 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
FNDC3A-206ENST00000541916 LOC100996750A0A140TA64 210 aa2.65□□□□□ -1.99
FNDC3A-206ENST00000541916 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
FNDC3A-206ENST00000541916 KRTAP19-7Q3SYF9 63 aa2.61□□□□□ -1.99
FNDC3A-206ENST00000541916 LCE5AQ5TCM9 118 aa2.6□□□□□ -1.99
FNDC3A-206ENST00000541916 MT1AP04731 61 aa2.58□□□□□ -2
FNDC3A-206ENST00000541916 NEBP20929 6669 aa2.55□□□□□ -2
FNDC3A-206ENST00000541916 SSPOA2VEC9 5147 aa2.45□□□□□ -2.02
FNDC3A-206ENST00000541916 KRTAP5-9P26371 169 aa2.44□□□□□ -2.02
FNDC3A-206ENST00000541916 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
FNDC3A-206ENST00000541916 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
FNDC3A-206ENST00000541916 KRTAP9-9Q9BYP9 154 aa2.42□□□□□ -2.02
FNDC3A-206ENST00000541916 USH2AO75445 5202 aa2.42□□□□□ -2.02
FNDC3A-206ENST00000541916 KRTAP9-4Q9BYQ2 154 aa2.42□□□□□ -2.02
FNDC3A-206ENST00000541916 PRM1P04553 51 aa2.41□□□□□ -2.02
FNDC3A-206ENST00000541916 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
FNDC3A-206ENST00000541916 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
FNDC3A-206ENST00000541916 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
FNDC3A-206ENST00000541916 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
FNDC3A-206ENST00000541916 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
FNDC3A-206ENST00000541916 FCGBPQ9Y6R7 5405 aaPredicted RBP2.31□□□□□ -2.04
FNDC3A-206ENST00000541916 KRTAP9-6A8MVA2 160 aa2.28□□□□□ -2.04
FNDC3A-206ENST00000541916 KMT2DO14686 5537 aa2.27□□□□□ -2.05
FNDC3A-206ENST00000541916 KRTAP4-6Q9BYQ5 205 aa2.26□□□□□ -2.05
FNDC3A-206ENST00000541916 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
FNDC3A-206ENST00000541916 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
FNDC3A-206ENST00000541916 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
FNDC3A-206ENST00000541916 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
FNDC3A-206ENST00000541916 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
FNDC3A-206ENST00000541916 MDN1Q9NU22 5596 aa2.12□□□□□ -2.07
FNDC3A-206ENST00000541916 KRTAP4-11Q9BYQ6 195 aa2.05□□□□□ -2.08
FNDC3A-206ENST00000541916 MUC12Q9UKN1 5478 aa2□□□□□ -2.09
FNDC3A-206ENST00000541916 KRTAP5-3Q6L8H2 238 aa1.99□□□□□ -2.09
FNDC3A-206ENST00000541916 KRTAP4-12Q9BQ66 201 aa1.96□□□□□ -2.1
FNDC3A-206ENST00000541916 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.1
FNDC3A-206ENST00000541916 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
FNDC3A-206ENST00000541916 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
FNDC3A-206ENST00000541916 KRTAP5-5Q701N2 237 aaPredicted RBP1.81□□□□□ -2.12
FNDC3A-206ENST00000541916 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
FNDC3A-206ENST00000541916 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
FNDC3A-206ENST00000541916 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
FNDC3A-206ENST00000541916 PHGR1C9JFL3 82 aa1.65□□□□□ -2.14
FNDC3A-206ENST00000541916 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
FNDC3A-206ENST00000541916 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
FNDC3A-206ENST00000541916 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
FNDC3A-206ENST00000541916 KRTAP5-2Q701N4 177 aa1.56□□□□□ -2.16
FNDC3A-206ENST00000541916 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
FNDC3A-206ENST00000541916 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
FNDC3A-206ENST00000541916 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
FNDC3A-206ENST00000541916 KRTAP5-1Q6L8H4 278 aa1.41□□□□□ -2.18
FNDC3A-206ENST00000541916 KRTAP5-11Q6L8G4 156 aa1.38□□□□□ -2.19
FNDC3A-206ENST00000541916 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
FNDC3A-206ENST00000541916 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
FNDC3A-206ENST00000541916 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 155.5 ms