RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
GCFC2-211ENST00000541687 KRTAP19-7Q3SYF9 63 aa4.8□□□□□ -1.64
GCFC2-211ENST00000541687 KRTAP4-3Q9BYR4 195 aa4.78□□□□□ -1.64
GCFC2-211ENST00000541687 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
GCFC2-211ENST00000541687 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
GCFC2-211ENST00000541687 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
GCFC2-211ENST00000541687 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
GCFC2-211ENST00000541687 SPRR2EP22531 72 aa4.65□□□□□ -1.67
GCFC2-211ENST00000541687 SPRR2BP35325 72 aa4.65□□□□□ -1.67
GCFC2-211ENST00000541687 SPRR2AP35326 72 aa4.65□□□□□ -1.67
GCFC2-211ENST00000541687 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
GCFC2-211ENST00000541687 KRTAP19-6Q3LI70 58 aa4.62□□□□□ -1.67
GCFC2-211ENST00000541687 MT1MQ8N339 61 aa4.61□□□□□ -1.67
GCFC2-211ENST00000541687 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
GCFC2-211ENST00000541687 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
GCFC2-211ENST00000541687 LCE3EQ5T5B0 92 aa4.55□□□□□ -1.68
GCFC2-211ENST00000541687 SSPOA2VEC9 5147 aa4.53□□□□□ -1.68
GCFC2-211ENST00000541687 MUC12Q9UKN1 5478 aa4.5□□□□□ -1.69
GCFC2-211ENST00000541687 KRTAP2-3P0C7H8 128 aa4.49□□□□□ -1.69
GCFC2-211ENST00000541687 KRTAP2-4Q9BYR9 128 aa4.49□□□□□ -1.69
GCFC2-211ENST00000541687 KRTAP2-1Q9BYU5 128 aa4.49□□□□□ -1.69
GCFC2-211ENST00000541687 SPRR2DP22532 72 aa4.45□□□□□ -1.7
GCFC2-211ENST00000541687 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
GCFC2-211ENST00000541687 KRTAP9-2Q9BYQ4 174 aa4.35□□□□□ -1.71
GCFC2-211ENST00000541687 LCE2DQ5TA82 110 aaPredicted RBP4.35□□□□□ -1.71
GCFC2-211ENST00000541687 PRM1P04553 51 aa4.31□□□□□ -1.72
GCFC2-211ENST00000541687 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
GCFC2-211ENST00000541687 MT4P47944 62 aa4.18□□□□□ -1.74
GCFC2-211ENST00000541687 KRTAP6-1Q3LI64 71 aa4.18□□□□□ -1.74
GCFC2-211ENST00000541687 MT1AP04731 61 aa4.15□□□□□ -1.74
GCFC2-211ENST00000541687 MT3P25713 68 aa4.15□□□□□ -1.74
GCFC2-211ENST00000541687 MUC19Q7Z5P9 8384 aa4.14□□□□□ -1.75
GCFC2-211ENST00000541687 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
GCFC2-211ENST00000541687 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
GCFC2-211ENST00000541687 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
GCFC2-211ENST00000541687 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
GCFC2-211ENST00000541687 KRTAP9-6A0A140TA67 174 aa3.96□□□□□ -1.78
GCFC2-211ENST00000541687 KRTAP9-7A8MTY7 169 aa3.95□□□□□ -1.78
GCFC2-211ENST00000541687 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
GCFC2-211ENST00000541687 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
GCFC2-211ENST00000541687 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.8□□□□□ -1.8
GCFC2-211ENST00000541687 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
GCFC2-211ENST00000541687 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
GCFC2-211ENST00000541687 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
GCFC2-211ENST00000541687 KRTAP20-1Q3LI63 56 aa3.57□□□□□ -1.84
GCFC2-211ENST00000541687 NEBP20929 6669 aa3.53□□□□□ -1.84
GCFC2-211ENST00000541687 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
GCFC2-211ENST00000541687 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
GCFC2-211ENST00000541687 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
GCFC2-211ENST00000541687 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
GCFC2-211ENST00000541687 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
GCFC2-211ENST00000541687 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
GCFC2-211ENST00000541687 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
GCFC2-211ENST00000541687 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
GCFC2-211ENST00000541687 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
GCFC2-211ENST00000541687 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
GCFC2-211ENST00000541687 HMCN1Q96RW7 5635 aa3.18□□□□□ -1.9
GCFC2-211ENST00000541687 KRTAP5-4Q6L8H1 288 aa3.17□□□□□ -1.9
GCFC2-211ENST00000541687 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
GCFC2-211ENST00000541687 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
GCFC2-211ENST00000541687 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
GCFC2-211ENST00000541687 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
GCFC2-211ENST00000541687 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
GCFC2-211ENST00000541687 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
GCFC2-211ENST00000541687 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
GCFC2-211ENST00000541687 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
GCFC2-211ENST00000541687 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
GCFC2-211ENST00000541687 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
GCFC2-211ENST00000541687 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
GCFC2-211ENST00000541687 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
GCFC2-211ENST00000541687 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
GCFC2-211ENST00000541687 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
GCFC2-211ENST00000541687 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
GCFC2-211ENST00000541687 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
GCFC2-211ENST00000541687 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
GCFC2-211ENST00000541687 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
GCFC2-211ENST00000541687 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 73.9 ms