RNA–Protein interactions for RNA: ENST00000540875.1

AC090023.2-201, humanhuman

TSL 3 BASIC

Gene AC090023.2, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090023.2-201ENST00000540875 TNXBP22105 4242 aa2.33□□□□□ -2.04
AC090023.2-201ENST00000540875 C9orf92A6NGG3 77 aa2.32□□□□□ -2.04
AC090023.2-201ENST00000540875 TNP1P09430 55 aa2.29□□□□□ -2.04
AC090023.2-201ENST00000540875 LPAP08519 4548 aa2.27□□□□□ -2.05
AC090023.2-201ENST00000540875 KRTAP10-1P60331 282 aa2.26□□□□□ -2.05
AC090023.2-201ENST00000540875 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
AC090023.2-201ENST00000540875 MT1HL1P0DM35 61 aa2.22□□□□□ -2.05
AC090023.2-201ENST00000540875 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
AC090023.2-201ENST00000540875 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
AC090023.2-201ENST00000540875 KRTAP10-4P60372 401 aaPredicted RBP2.19□□□□□ -2.06
AC090023.2-201ENST00000540875 SSPOA2VEC9 5147 aa2.18□□□□□ -2.06
AC090023.2-201ENST00000540875 KRTAP20-1Q3LI63 56 aa2.13□□□□□ -2.07
AC090023.2-201ENST00000540875 KRTAP4-3Q9BYR4 195 aa2.12□□□□□ -2.07
AC090023.2-201ENST00000540875 KRTAP10-10P60014 251 aa2.11□□□□□ -2.07
AC090023.2-201ENST00000540875 OBSCNQ5VST9 7968 aa2.09□□□□□ -2.07
AC090023.2-201ENST00000540875 FCGBPQ9Y6R7 5405 aaPredicted RBP2.08□□□□□ -2.08
AC090023.2-201ENST00000540875 KRTAP8-1Q8IUC2 63 aa2.07□□□□□ -2.08
AC090023.2-201ENST00000540875 USH2AO75445 5202 aa2.06□□□□□ -2.08
AC090023.2-201ENST00000540875 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
AC090023.2-201ENST00000540875 MUC17Q685J3 4493 aa2.05□□□□□ -2.08
AC090023.2-201ENST00000540875 FLGP20930 4061 aaPredicted RBP2.01□□□□□ -2.09
AC090023.2-201ENST00000540875 LCE3AQ5TA76 89 aa1.99□□□□□ -2.09
AC090023.2-201ENST00000540875 DSTQ03001 7570 aaKnown RBP1.99□□□□□ -2.09
AC090023.2-201ENST00000540875 KMT2DO14686 5537 aa1.97□□□□□ -2.09
AC090023.2-201ENST00000540875 MUC12Q9UKN1 5478 aa1.96□□□□□ -2.1
AC090023.2-201ENST00000540875 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
AC090023.2-201ENST00000540875 KRTAP2-3P0C7H8 128 aa1.94□□□□□ -2.1
AC090023.2-201ENST00000540875 KRTAP6-3Q3LI67 103 aa1.94□□□□□ -2.1
AC090023.2-201ENST00000540875 KRTAP2-4Q9BYR9 128 aa1.94□□□□□ -2.1
AC090023.2-201ENST00000540875 KRTAP2-1Q9BYU5 128 aa1.94□□□□□ -2.1
AC090023.2-201ENST00000540875 MT1HP80294 61 aa1.93□□□□□ -2.1
AC090023.2-201ENST00000540875 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
AC090023.2-201ENST00000540875 KRTAP4-1Q9BYQ7 146 aa1.91□□□□□ -2.1
AC090023.2-201ENST00000540875 SPRR2GQ9BYE4 73 aa1.9□□□□□ -2.11
AC090023.2-201ENST00000540875 M0R2T5 61 aa1.89□□□□□ -2.11
AC090023.2-201ENST00000540875 MDN1Q9NU22 5596 aa1.88□□□□□ -2.11
AC090023.2-201ENST00000540875 KRTAP19-2Q3LHN2 52 aa1.86□□□□□ -2.11
AC090023.2-201ENST00000540875 KRTAP5-5Q701N2 237 aaPredicted RBP1.85□□□□□ -2.11
AC090023.2-201ENST00000540875 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
AC090023.2-201ENST00000540875 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
AC090023.2-201ENST00000540875 KRTAP19-6Q3LI70 58 aa1.79□□□□□ -2.12
AC090023.2-201ENST00000540875 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
AC090023.2-201ENST00000540875 KRTAP19-8Q3LI54 63 aa1.75□□□□□ -2.13
AC090023.2-201ENST00000540875 KRTAP19-5Q3LI72 72 aa1.74□□□□□ -2.13
AC090023.2-201ENST00000540875 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
AC090023.2-201ENST00000540875 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
AC090023.2-201ENST00000540875 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
AC090023.2-201ENST00000540875 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
AC090023.2-201ENST00000540875 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
AC090023.2-201ENST00000540875 MT2AP02795 61 aa1.7□□□□□ -2.14
AC090023.2-201ENST00000540875 MT1FP04733 61 aa1.69□□□□□ -2.14
AC090023.2-201ENST00000540875 MT1XP80297 61 aa1.69□□□□□ -2.14
AC090023.2-201ENST00000540875 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
AC090023.2-201ENST00000540875 SPRR2EP22531 72 aa1.65□□□□□ -2.15
AC090023.2-201ENST00000540875 SPRR2BP35325 72 aa1.65□□□□□ -2.15
AC090023.2-201ENST00000540875 SPRR2AP35326 72 aa1.65□□□□□ -2.15
AC090023.2-201ENST00000540875 MT1BP07438 61 aa1.61□□□□□ -2.15
AC090023.2-201ENST00000540875 MT1AP04731 61 aa1.6□□□□□ -2.15
AC090023.2-201ENST00000540875 MT1EP04732 61 aa1.6□□□□□ -2.15
AC090023.2-201ENST00000540875 SPRR2DP22532 72 aa1.6□□□□□ -2.15
AC090023.2-201ENST00000540875 SPRR2FQ96RM1 72 aa1.58□□□□□ -2.16
AC090023.2-201ENST00000540875 MT1LQ93083 61 aa1.56□□□□□ -2.16
AC090023.2-201ENST00000540875 PRM1P04553 51 aa1.55□□□□□ -2.16
AC090023.2-201ENST00000540875 KRTAP19-7Q3SYF9 63 aa1.5□□□□□ -2.17
AC090023.2-201ENST00000540875 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
AC090023.2-201ENST00000540875 MT4P47944 62 aa1.44□□□□□ -2.18
AC090023.2-201ENST00000540875 KRTAP6-2Q3LI66 62 aa1.38□□□□□ -2.19
AC090023.2-201ENST00000540875 MT1GP13640 62 aa1.36□□□□□ -2.19
AC090023.2-201ENST00000540875 SYNE1Q8NF91 8797 aaKnown RBP1.33□□□□□ -2.2
AC090023.2-201ENST00000540875 MT1MQ8N339 61 aa1.33□□□□□ -2.2
AC090023.2-201ENST00000540875 KRTAP19-3Q7Z4W3 81 aa1.31□□□□□ -2.2
AC090023.2-201ENST00000540875 KRTAP20-2Q3LI61 65 aa1.24□□□□□ -2.21
AC090023.2-201ENST00000540875 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
AC090023.2-201ENST00000540875 KRTAP6-1Q3LI64 71 aa1.23□□□□□ -2.21
AC090023.2-201ENST00000540875 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
AC090023.2-201ENST00000540875 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
AC090023.2-201ENST00000540875 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 76.3 ms