RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 MT1BP07438 61 aa4.11□□□□□ -1.75
MDH1-215ENST00000539945 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
MDH1-215ENST00000539945 KRTAP4-3Q9BYR4 195 aa4.04□□□□□ -1.76
MDH1-215ENST00000539945 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
MDH1-215ENST00000539945 KRTAP25-1Q3LHN0 102 aa4.04□□□□□ -1.76
MDH1-215ENST00000539945 MT1XP80297 61 aa3.99□□□□□ -1.77
MDH1-215ENST00000539945 TNP1P09430 55 aa3.97□□□□□ -1.77
MDH1-215ENST00000539945 PRO2289Q9P1D8 64 aa3.95□□□□□ -1.78
MDH1-215ENST00000539945 CRCT1Q9UGL9 99 aa3.93□□□□□ -1.78
MDH1-215ENST00000539945 PP632Q6XCG6 107 aa3.9□□□□□ -1.78
MDH1-215ENST00000539945 USH2AO75445 5202 aa3.87□□□□□ -1.79
MDH1-215ENST00000539945 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
MDH1-215ENST00000539945 KRTAP19-6Q3LI70 58 aa3.83□□□□□ -1.8
MDH1-215ENST00000539945 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
MDH1-215ENST00000539945 FSIP2Q5CZC0 6907 aa3.79□□□□□ -1.8
MDH1-215ENST00000539945 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
MDH1-215ENST00000539945 SSPOA2VEC9 5147 aa3.76□□□□□ -1.81
MDH1-215ENST00000539945 KRTAP8-1Q8IUC2 63 aa3.74□□□□□ -1.81
MDH1-215ENST00000539945 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
MDH1-215ENST00000539945 KRTAP12-3P60328 96 aa3.65□□□□□ -1.83
MDH1-215ENST00000539945 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
MDH1-215ENST00000539945 FCGBPQ9Y6R7 5405 aaPredicted RBP3.59□□□□□ -1.83
MDH1-215ENST00000539945 KRTAP19-7Q3SYF9 63 aa3.56□□□□□ -1.84
MDH1-215ENST00000539945 KMT2DO14686 5537 aa3.52□□□□□ -1.85
MDH1-215ENST00000539945 MT1EP04732 61 aa3.49□□□□□ -1.85
MDH1-215ENST00000539945 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
MDH1-215ENST00000539945 MT1LQ93083 61 aa3.44□□□□□ -1.86
MDH1-215ENST00000539945 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
MDH1-215ENST00000539945 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
MDH1-215ENST00000539945 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
MDH1-215ENST00000539945 MACF1Q9UPN3 7388 aaKnown RBP3.36□□□□□ -1.87
MDH1-215ENST00000539945 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
MDH1-215ENST00000539945 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
MDH1-215ENST00000539945 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.88
MDH1-215ENST00000539945 MT1GP13640 62 aa3.33□□□□□ -1.88
MDH1-215ENST00000539945 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
MDH1-215ENST00000539945 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
MDH1-215ENST00000539945 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
MDH1-215ENST00000539945 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
MDH1-215ENST00000539945 MT1MQ8N339 61 aa3.28□□□□□ -1.88
MDH1-215ENST00000539945 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
MDH1-215ENST00000539945 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
MDH1-215ENST00000539945 MUC12Q9UKN1 5478 aa3.27□□□□□ -1.89
MDH1-215ENST00000539945 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
MDH1-215ENST00000539945 NEBP20929 6669 aa3.23□□□□□ -1.89
MDH1-215ENST00000539945 SPRR2EP22531 72 aa3.19□□□□□ -1.9
MDH1-215ENST00000539945 SPRR2BP35325 72 aa3.19□□□□□ -1.9
MDH1-215ENST00000539945 SPRR2AP35326 72 aa3.19□□□□□ -1.9
MDH1-215ENST00000539945 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
MDH1-215ENST00000539945 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
MDH1-215ENST00000539945 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
MDH1-215ENST00000539945 SPRR2DP22532 72 aa3.08□□□□□ -1.92
MDH1-215ENST00000539945 KRTAP2-1Q9BYU5 128 aa3.02□□□□□ -1.93
MDH1-215ENST00000539945 DSTQ03001 7570 aaKnown RBP2.99□□□□□ -1.93
MDH1-215ENST00000539945 MT1AP04731 61 aa2.92□□□□□ -1.94
MDH1-215ENST00000539945 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
MDH1-215ENST00000539945 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
MDH1-215ENST00000539945 INE1O15225 51 aa2.75□□□□□ -1.97
MDH1-215ENST00000539945 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
MDH1-215ENST00000539945 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
MDH1-215ENST00000539945 SYNE1Q8NF91 8797 aaKnown RBP2.7□□□□□ -1.98
MDH1-215ENST00000539945 MT4P47944 62 aa2.65□□□□□ -1.99
MDH1-215ENST00000539945 KRTAP6-2Q3LI66 62 aa2.65□□□□□ -1.99
MDH1-215ENST00000539945 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
MDH1-215ENST00000539945 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
MDH1-215ENST00000539945 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
MDH1-215ENST00000539945 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
MDH1-215ENST00000539945 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
MDH1-215ENST00000539945 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
MDH1-215ENST00000539945 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.04
MDH1-215ENST00000539945 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
MDH1-215ENST00000539945 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
MDH1-215ENST00000539945 PRM1P04553 51 aa2.18□□□□□ -2.06
MDH1-215ENST00000539945 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
MDH1-215ENST00000539945 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
MDH1-215ENST00000539945 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
MDH1-215ENST00000539945 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 108.3 ms