RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 KRTAP10-5P60370 271 aa4.85□□□□□ -1.63
DDX55-206ENST00000539934 SPRR2EP22531 72 aa4.79□□□□□ -1.64
DDX55-206ENST00000539934 SPRR2BP35325 72 aa4.79□□□□□ -1.64
DDX55-206ENST00000539934 SPRR2AP35326 72 aa4.79□□□□□ -1.64
DDX55-206ENST00000539934 SPRR2FQ96RM1 72 aa4.78□□□□□ -1.64
DDX55-206ENST00000539934 KRTAP2-1Q9BYU5 128 aa4.73□□□□□ -1.65
DDX55-206ENST00000539934 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
DDX55-206ENST00000539934 DSTQ03001 7570 aaKnown RBP4.69□□□□□ -1.66
DDX55-206ENST00000539934 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
DDX55-206ENST00000539934 KRTAP10-12P60413 245 aa4.69□□□□□ -1.66
DDX55-206ENST00000539934 GPR98Q8WXG9 6306 aa4.68□□□□□ -1.66
DDX55-206ENST00000539934 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
DDX55-206ENST00000539934 SPRR2DP22532 72 aa4.62□□□□□ -1.67
DDX55-206ENST00000539934 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
DDX55-206ENST00000539934 KRTAP8-1Q8IUC2 63 aa4.6□□□□□ -1.67
DDX55-206ENST00000539934 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
DDX55-206ENST00000539934 KRTAP4-8A0A0G2JLE6 195 aa4.53□□□□□ -1.68
DDX55-206ENST00000539934 KRTAP4-8Q9BYQ9 185 aa4.53□□□□□ -1.68
DDX55-206ENST00000539934 KRTAP12-3P60328 96 aa4.52□□□□□ -1.69
DDX55-206ENST00000539934 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
DDX55-206ENST00000539934 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
DDX55-206ENST00000539934 LCE5AQ5TCM9 118 aa4.38□□□□□ -1.71
DDX55-206ENST00000539934 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
DDX55-206ENST00000539934 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
DDX55-206ENST00000539934 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
DDX55-206ENST00000539934 KRTAP9-4Q9BYQ2 154 aa4.29□□□□□ -1.72
DDX55-206ENST00000539934 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
DDX55-206ENST00000539934 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
DDX55-206ENST00000539934 MT1EP04732 61 aa4.24□□□□□ -1.73
DDX55-206ENST00000539934 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
DDX55-206ENST00000539934 HMCN1Q96RW7 5635 aa4.22□□□□□ -1.73
DDX55-206ENST00000539934 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
DDX55-206ENST00000539934 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
DDX55-206ENST00000539934 MT1LQ93083 61 aa4.18□□□□□ -1.74
DDX55-206ENST00000539934 MT4P47944 62 aa4.16□□□□□ -1.74
DDX55-206ENST00000539934 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
DDX55-206ENST00000539934 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
DDX55-206ENST00000539934 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
DDX55-206ENST00000539934 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
DDX55-206ENST00000539934 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
DDX55-206ENST00000539934 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
DDX55-206ENST00000539934 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
DDX55-206ENST00000539934 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
DDX55-206ENST00000539934 MT1GP13640 62 aa4.02□□□□□ -1.77
DDX55-206ENST00000539934 MT1MQ8N339 61 aa3.99□□□□□ -1.77
DDX55-206ENST00000539934 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
DDX55-206ENST00000539934 KRTAP5-7Q6L8G8 165 aa3.91□□□□□ -1.78
DDX55-206ENST00000539934 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.79
DDX55-206ENST00000539934 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
DDX55-206ENST00000539934 PRM1P04553 51 aa3.82□□□□□ -1.8
DDX55-206ENST00000539934 MT3P25713 68 aa3.77□□□□□ -1.81
DDX55-206ENST00000539934 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
DDX55-206ENST00000539934 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.82
DDX55-206ENST00000539934 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.82
DDX55-206ENST00000539934 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
DDX55-206ENST00000539934 MT1AP04731 61 aa3.55□□□□□ -1.84
DDX55-206ENST00000539934 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
DDX55-206ENST00000539934 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
DDX55-206ENST00000539934 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
DDX55-206ENST00000539934 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
DDX55-206ENST00000539934 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
DDX55-206ENST00000539934 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
DDX55-206ENST00000539934 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
DDX55-206ENST00000539934 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
DDX55-206ENST00000539934 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
DDX55-206ENST00000539934 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
DDX55-206ENST00000539934 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
DDX55-206ENST00000539934 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
DDX55-206ENST00000539934 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
DDX55-206ENST00000539934 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
DDX55-206ENST00000539934 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.98
DDX55-206ENST00000539934 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
DDX55-206ENST00000539934 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
DDX55-206ENST00000539934 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
DDX55-206ENST00000539934 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
DDX55-206ENST00000539934 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
DDX55-206ENST00000539934 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
DDX55-206ENST00000539934 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms