RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 MT1GP13640 62 aa5.93□□□□□ -1.46
LTBR-207ENST00000539925 KRTAP19-3Q7Z4W3 81 aa5.93□□□□□ -1.46
LTBR-207ENST00000539925 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
LTBR-207ENST00000539925 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
LTBR-207ENST00000539925 A0A0A0MQY5 61 aa5.85□□□□□ -1.47
LTBR-207ENST00000539925 KRTAP5-9P26371 169 aa5.83□□□□□ -1.48
LTBR-207ENST00000539925 MT1MQ8N339 61 aa5.8□□□□□ -1.48
LTBR-207ENST00000539925 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
LTBR-207ENST00000539925 LCE5AQ5TCM9 118 aa5.79□□□□□ -1.48
LTBR-207ENST00000539925 KRTAP6-3Q3LI67 103 aa5.77□□□□□ -1.49
LTBR-207ENST00000539925 SYNE2Q8WXH0 6885 aaKnown RBP5.76□□□□□ -1.49
LTBR-207ENST00000539925 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.5
LTBR-207ENST00000539925 MUC12Q9UKN1 5478 aa5.67□□□□□ -1.5
LTBR-207ENST00000539925 LCE1AQ5T7P2 110 aa5.63□□□□□ -1.51
LTBR-207ENST00000539925 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.52
LTBR-207ENST00000539925 SPRR2EP22531 72 aa5.58□□□□□ -1.52
LTBR-207ENST00000539925 SPRR2BP35325 72 aa5.58□□□□□ -1.52
LTBR-207ENST00000539925 SPRR2AP35326 72 aa5.58□□□□□ -1.52
LTBR-207ENST00000539925 KRTAP2-3P0C7H8 128 aa5.46□□□□□ -1.54
LTBR-207ENST00000539925 KRTAP2-4Q9BYR9 128 aa5.46□□□□□ -1.54
LTBR-207ENST00000539925 KRTAP2-1Q9BYU5 128 aa5.46□□□□□ -1.54
LTBR-207ENST00000539925 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
LTBR-207ENST00000539925 NEBP20929 6669 aa5.41□□□□□ -1.54
LTBR-207ENST00000539925 MDN1Q9NU22 5596 aa5.39□□□□□ -1.55
LTBR-207ENST00000539925 SPRR2DP22532 72 aa5.37□□□□□ -1.55
LTBR-207ENST00000539925 INE1O15225 51 aa5.36□□□□□ -1.55
LTBR-207ENST00000539925 KRTAP20-1Q3LI63 56 aa5.29□□□□□ -1.56
LTBR-207ENST00000539925 DSTQ03001 7570 aaKnown RBP5.23□□□□□ -1.57
LTBR-207ENST00000539925 KRTAP5-5Q701N2 237 aaPredicted RBP5.21□□□□□ -1.57
LTBR-207ENST00000539925 MT1AP04731 61 aa5.21□□□□□ -1.58
LTBR-207ENST00000539925 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
LTBR-207ENST00000539925 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
LTBR-207ENST00000539925 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
LTBR-207ENST00000539925 KRTAP5-4Q6L8H1 288 aa4.92□□□□□ -1.62
LTBR-207ENST00000539925 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
LTBR-207ENST00000539925 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
LTBR-207ENST00000539925 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
LTBR-207ENST00000539925 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
LTBR-207ENST00000539925 MT3P25713 68 aa4.74□□□□□ -1.65
LTBR-207ENST00000539925 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
LTBR-207ENST00000539925 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
LTBR-207ENST00000539925 KRTAP4-9Q9BYQ8 210 aa4.65□□□□□ -1.66
LTBR-207ENST00000539925 MT4P47944 62 aa4.6□□□□□ -1.67
LTBR-207ENST00000539925 KRTAP20-2Q3LI61 65 aa4.57□□□□□ -1.68
LTBR-207ENST00000539925 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
LTBR-207ENST00000539925 KRTAP4-6Q9BYQ5 205 aa4.57□□□□□ -1.68
LTBR-207ENST00000539925 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
LTBR-207ENST00000539925 KRTAP5-2Q701N4 177 aa4.49□□□□□ -1.69
LTBR-207ENST00000539925 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
LTBR-207ENST00000539925 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
LTBR-207ENST00000539925 GPR98Q8WXG9 6306 aa4.27□□□□□ -1.73
LTBR-207ENST00000539925 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
LTBR-207ENST00000539925 AHNAK2Q8IVF2 5795 aa4.17□□□□□ -1.74
LTBR-207ENST00000539925 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
LTBR-207ENST00000539925 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
LTBR-207ENST00000539925 PRM1P04553 51 aa4□□□□□ -1.77
LTBR-207ENST00000539925 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
LTBR-207ENST00000539925 KRTAP4-11Q9BYQ6 195 aa3.93□□□□□ -1.78
LTBR-207ENST00000539925 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
LTBR-207ENST00000539925 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
LTBR-207ENST00000539925 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
LTBR-207ENST00000539925 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
LTBR-207ENST00000539925 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
LTBR-207ENST00000539925 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
LTBR-207ENST00000539925 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
LTBR-207ENST00000539925 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
LTBR-207ENST00000539925 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
LTBR-207ENST00000539925 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
LTBR-207ENST00000539925 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
LTBR-207ENST00000539925 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
LTBR-207ENST00000539925 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
LTBR-207ENST00000539925 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
LTBR-207ENST00000539925 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
LTBR-207ENST00000539925 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
LTBR-207ENST00000539925 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
LTBR-207ENST00000539925 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
LTBR-207ENST00000539925 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 120 ms