RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 KRTAP9-4Q9BYQ2 154 aa2.14□□□□□ -2.07
RAB3GAP1-207ENST00000539493 KRTAP4-2Q9BYR5 136 aa2.13□□□□□ -2.07
RAB3GAP1-207ENST00000539493 KRTAP2-2Q9BYT5 123 aa2.12□□□□□ -2.07
RAB3GAP1-207ENST00000539493 KRTAP10-7P60409 375 aaPredicted RBP2.11□□□□□ -2.07
RAB3GAP1-207ENST00000539493 KRTAP12-3P60328 96 aa2.1□□□□□ -2.07
RAB3GAP1-207ENST00000539493 KMT2DO14686 5537 aa2.07□□□□□ -2.08
RAB3GAP1-207ENST00000539493 SSPOA2VEC9 5147 aa2.05□□□□□ -2.08
RAB3GAP1-207ENST00000539493 LCE3CQ5T5A8 94 aa2.04□□□□□ -2.08
RAB3GAP1-207ENST00000539493 FSIP2Q5CZC0 6907 aa2.03□□□□□ -2.08
RAB3GAP1-207ENST00000539493 KRTAP19-5Q3LI72 72 aa2□□□□□ -2.09
RAB3GAP1-207ENST00000539493 KRTAP9-6A8MVA2 160 aa1.99□□□□□ -2.09
RAB3GAP1-207ENST00000539493 KRTAP9-7A8MTY7 169 aa1.98□□□□□ -2.09
RAB3GAP1-207ENST00000539493 KRTAP4-11Q9BYQ6 195 aa1.98□□□□□ -2.09
RAB3GAP1-207ENST00000539493 KRTAP6-3Q3LI67 103 aa1.98□□□□□ -2.09
RAB3GAP1-207ENST00000539493 LCE4AQ5TA78 99 aa1.98□□□□□ -2.09
RAB3GAP1-207ENST00000539493 KRTAP19-6Q3LI70 58 aa1.98□□□□□ -2.09
RAB3GAP1-207ENST00000539493 CRCT1Q9UGL9 99 aa1.96□□□□□ -2.1
RAB3GAP1-207ENST00000539493 KRTAP19-7Q3SYF9 63 aa1.95□□□□□ -2.1
RAB3GAP1-207ENST00000539493 LCE5AQ5TCM9 118 aa1.93□□□□□ -2.1
RAB3GAP1-207ENST00000539493 FCGBPQ9Y6R7 5405 aaPredicted RBP1.92□□□□□ -2.1
RAB3GAP1-207ENST00000539493 LCE1AQ5T7P2 110 aa1.91□□□□□ -2.1
RAB3GAP1-207ENST00000539493 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
RAB3GAP1-207ENST00000539493 MT1EP04732 61 aa1.9□□□□□ -2.11
RAB3GAP1-207ENST00000539493 MT1LQ93083 61 aa1.88□□□□□ -2.11
RAB3GAP1-207ENST00000539493 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
RAB3GAP1-207ENST00000539493 MACF1Q9UPN3 7388 aaKnown RBP1.84□□□□□ -2.11
RAB3GAP1-207ENST00000539493 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.12
RAB3GAP1-207ENST00000539493 SYNE2Q8WXH0 6885 aaKnown RBP1.8□□□□□ -2.12
RAB3GAP1-207ENST00000539493 KRTAP19-3Q7Z4W3 81 aa1.8□□□□□ -2.12
RAB3GAP1-207ENST00000539493 MT1GP13640 62 aa1.78□□□□□ -2.12
RAB3GAP1-207ENST00000539493 MT1MQ8N339 61 aa1.77□□□□□ -2.13
RAB3GAP1-207ENST00000539493 SPRR2FQ96RM1 72 aa1.77□□□□□ -2.13
RAB3GAP1-207ENST00000539493 KRTAP4-3Q9BYR4 195 aa1.77□□□□□ -2.13
RAB3GAP1-207ENST00000539493 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
RAB3GAP1-207ENST00000539493 LCE1EQ5T753 118 aa1.77□□□□□ -2.13
RAB3GAP1-207ENST00000539493 DSTQ03001 7570 aaKnown RBP1.75□□□□□ -2.13
RAB3GAP1-207ENST00000539493 MT1AP04731 61 aa1.75□□□□□ -2.13
RAB3GAP1-207ENST00000539493 KRTAP5-5Q701N2 237 aaPredicted RBP1.75□□□□□ -2.13
RAB3GAP1-207ENST00000539493 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
RAB3GAP1-207ENST00000539493 PRM1P04553 51 aa1.73□□□□□ -2.13
RAB3GAP1-207ENST00000539493 KRTAP5-9P26371 169 aa1.71□□□□□ -2.14
RAB3GAP1-207ENST00000539493 NEBP20929 6669 aa1.69□□□□□ -2.14
RAB3GAP1-207ENST00000539493 KRTAP20-1Q3LI63 56 aa1.66□□□□□ -2.14
RAB3GAP1-207ENST00000539493 LCE3EQ5T5B0 92 aa1.65□□□□□ -2.15
RAB3GAP1-207ENST00000539493 GPR98Q8WXG9 6306 aa1.65□□□□□ -2.15
RAB3GAP1-207ENST00000539493 SPRR2EP22531 72 aa1.65□□□□□ -2.15
RAB3GAP1-207ENST00000539493 SPRR2BP35325 72 aa1.65□□□□□ -2.15
RAB3GAP1-207ENST00000539493 SPRR2AP35326 72 aa1.65□□□□□ -2.15
RAB3GAP1-207ENST00000539493 LCE1FQ5T754 118 aa1.64□□□□□ -2.15
RAB3GAP1-207ENST00000539493 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
RAB3GAP1-207ENST00000539493 SYNE1Q8NF91 8797 aaKnown RBP1.62□□□□□ -2.15
RAB3GAP1-207ENST00000539493 LCE3DQ9BYE3 92 aa1.61□□□□□ -2.15
RAB3GAP1-207ENST00000539493 KRTAP6-1Q3LI64 71 aa1.59□□□□□ -2.16
RAB3GAP1-207ENST00000539493 SPRR2DP22532 72 aa1.58□□□□□ -2.16
RAB3GAP1-207ENST00000539493 KRTAP6-2Q3LI66 62 aa1.56□□□□□ -2.16
RAB3GAP1-207ENST00000539493 OBSCNQ5VST9 7968 aa1.5□□□□□ -2.17
RAB3GAP1-207ENST00000539493 MT3P25713 68 aa1.46□□□□□ -2.18
RAB3GAP1-207ENST00000539493 KRTAP5-4Q6L8H1 288 aa1.46□□□□□ -2.18
RAB3GAP1-207ENST00000539493 MT4P47944 62 aa1.39□□□□□ -2.19
RAB3GAP1-207ENST00000539493 KRTAP20-2Q3LI61 65 aa1.36□□□□□ -2.19
RAB3GAP1-207ENST00000539493 AHNAK2Q8IVF2 5795 aa1.36□□□□□ -2.19
RAB3GAP1-207ENST00000539493 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.19
RAB3GAP1-207ENST00000539493 KRTAP5-7Q6L8G8 165 aa1.31□□□□□ -2.2
RAB3GAP1-207ENST00000539493 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
RAB3GAP1-207ENST00000539493 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
RAB3GAP1-207ENST00000539493 MUC19Q7Z5P9 8384 aa1.26□□□□□ -2.21
RAB3GAP1-207ENST00000539493 KRTAP5-8O75690 187 aa1.26□□□□□ -2.21
RAB3GAP1-207ENST00000539493 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
RAB3GAP1-207ENST00000539493 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
RAB3GAP1-207ENST00000539493 KRTAP4-4Q9BYR3 166 aa1.22□□□□□ -2.21
RAB3GAP1-207ENST00000539493 MUC5ACP98088 5654 aa1.21□□□□□ -2.22
RAB3GAP1-207ENST00000539493 LCE1CQ5T751 118 aa1.19□□□□□ -2.22
RAB3GAP1-207ENST00000539493 LCE1BQ5T7P3 118 aa1.19□□□□□ -2.22
RAB3GAP1-207ENST00000539493 KRTAP5-1Q6L8H4 278 aa1.19□□□□□ -2.22
RAB3GAP1-207ENST00000539493 KRTAP21-2Q3LI59 83 aa1.04□□□□□ -2.24
RAB3GAP1-207ENST00000539493 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
RAB3GAP1-207ENST00000539493 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 77 ms