RNA–Protein interactions for RNA: ENST00000539426.5

DDB1-214, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-214ENST00000539426 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
DDB1-214ENST00000539426 LCE3AQ5TA76 89 aa3.76□□□□□ -1.81
DDB1-214ENST00000539426 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
DDB1-214ENST00000539426 KRTAP4-7Q9BYR0 210 aa3.69□□□□□ -1.82
DDB1-214ENST00000539426 A8MU10 97 aa3.68□□□□□ -1.82
DDB1-214ENST00000539426 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
DDB1-214ENST00000539426 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
DDB1-214ENST00000539426 TNP1P09430 55 aa3.66□□□□□ -1.82
DDB1-214ENST00000539426 SMIM26A0A096LP01 95 aa3.65□□□□□ -1.83
DDB1-214ENST00000539426 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
DDB1-214ENST00000539426 H7BZZ5 65 aa3.61□□□□□ -1.83
DDB1-214ENST00000539426 A0A1B0GU69 56 aa3.6□□□□□ -1.83
DDB1-214ENST00000539426 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
DDB1-214ENST00000539426 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
DDB1-214ENST00000539426 COX7CP15954 63 aa3.59□□□□□ -1.83
DDB1-214ENST00000539426 PCP4P48539 62 aa3.58□□□□□ -1.84
DDB1-214ENST00000539426 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
DDB1-214ENST00000539426 ANAPC13Q9BS18 74 aa3.58□□□□□ -1.84
DDB1-214ENST00000539426 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
DDB1-214ENST00000539426 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
DDB1-214ENST00000539426 KRTAP12-4P60329 112 aa3.51□□□□□ -1.85
DDB1-214ENST00000539426 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
DDB1-214ENST00000539426 CCDC179H3BU77 68 aa3.45□□□□□ -1.86
DDB1-214ENST00000539426 ATP5EP56381 51 aaPredicted RBP3.44□□□□□ -1.86
DDB1-214ENST00000539426 TMEM258P61165 79 aa3.43□□□□□ -1.86
DDB1-214ENST00000539426 PRR15LQ9BU68 103 aa3.41□□□□□ -1.86
DDB1-214ENST00000539426 KRTAP23-1A1A580 65 aa3.4□□□□□ -1.87
DDB1-214ENST00000539426 LINC01558Q9Y6Z2 57 aa3.38□□□□□ -1.87
DDB1-214ENST00000539426 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
DDB1-214ENST00000539426 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
DDB1-214ENST00000539426 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
DDB1-214ENST00000539426 UQCR11O14957 56 aa3.31□□□□□ -1.88
DDB1-214ENST00000539426 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
DDB1-214ENST00000539426 RPS28P62857 69 aaKnown RBP3.28□□□□□ -1.88
DDB1-214ENST00000539426 KRTAP15-1Q3LI76 137 aa3.28□□□□□ -1.88
DDB1-214ENST00000539426 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
DDB1-214ENST00000539426 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
DDB1-214ENST00000539426 MT1AP04731 61 aa3.27□□□□□ -1.89
DDB1-214ENST00000539426 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
DDB1-214ENST00000539426 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
DDB1-214ENST00000539426 MIR22HGQ0VDD5 57 aa3.23□□□□□ -1.89
DDB1-214ENST00000539426 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
DDB1-214ENST00000539426 V9GYY9 64 aa3.21□□□□□ -1.9
DDB1-214ENST00000539426 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
DDB1-214ENST00000539426 K7ERS5 55 aa3.17□□□□□ -1.9
DDB1-214ENST00000539426 Q1T7F1 81 aa3.17□□□□□ -1.9
DDB1-214ENST00000539426 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
DDB1-214ENST00000539426 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.91
DDB1-214ENST00000539426 PSPHP1O15172 72 aa3.07□□□□□ -1.92
DDB1-214ENST00000539426 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
DDB1-214ENST00000539426 CDC42SE1Q9NRR8 79 aa3□□□□□ -1.93
DDB1-214ENST00000539426 A6NED7 52 aa2.99□□□□□ -1.93
DDB1-214ENST00000539426 PRO0628Q9UI54 55 aa2.99□□□□□ -1.93
DDB1-214ENST00000539426 MT3P25713 68 aa2.98□□□□□ -1.93
DDB1-214ENST00000539426 ROMO1P60602 79 aa2.95□□□□□ -1.94
DDB1-214ENST00000539426 A0A0A0MQY5 61 aa2.88□□□□□ -1.95
DDB1-214ENST00000539426 BRK1Q8WUW1 75 aa2.87□□□□□ -1.95
DDB1-214ENST00000539426 PMAIP1Q13794 54 aa2.85□□□□□ -1.95
DDB1-214ENST00000539426 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
DDB1-214ENST00000539426 KTN1-AS1Q86SY8 53 aa2.69□□□□□ -1.98
DDB1-214ENST00000539426 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
DDB1-214ENST00000539426 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
DDB1-214ENST00000539426 PRAC1Q96KF2 57 aa2.49□□□□□ -2.01
DDB1-214ENST00000539426 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
DDB1-214ENST00000539426 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
DDB1-214ENST00000539426 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
DDB1-214ENST00000539426 LUZP6Q538Z0 58 aa2.32□□□□□ -2.04
DDB1-214ENST00000539426 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
DDB1-214ENST00000539426 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
DDB1-214ENST00000539426 NDUFAF8A1L188 74 aa2.2□□□□□ -2.06
DDB1-214ENST00000539426 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
DDB1-214ENST00000539426 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
DDB1-214ENST00000539426 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
DDB1-214ENST00000539426 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
DDB1-214ENST00000539426 INE1O15225 51 aa1.9□□□□□ -2.11
DDB1-214ENST00000539426 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
DDB1-214ENST00000539426 PRM1P04553 51 aa1.52□□□□□ -2.17
DDB1-214ENST00000539426 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms