RNA–Protein interactions for RNA: ENST00000539318.5

NPIPB4-211, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-211ENST00000539318 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
NPIPB4-211ENST00000539318 SPRR2FQ96RM1 72 aa3.43□□□□□ -1.86
NPIPB4-211ENST00000539318 MDN1Q9NU22 5596 aa3.41□□□□□ -1.86
NPIPB4-211ENST00000539318 TNP1P09430 55 aa3.38□□□□□ -1.87
NPIPB4-211ENST00000539318 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
NPIPB4-211ENST00000539318 K7ERS5 55 aa3.36□□□□□ -1.87
NPIPB4-211ENST00000539318 LCE1AQ5T7P2 110 aa3.36□□□□□ -1.87
NPIPB4-211ENST00000539318 BRK1Q8WUW1 75 aa3.36□□□□□ -1.87
NPIPB4-211ENST00000539318 CDC42SE1Q9NRR8 79 aa3.36□□□□□ -1.87
NPIPB4-211ENST00000539318 NEBP20929 6669 aa3.35□□□□□ -1.87
NPIPB4-211ENST00000539318 SPRR2EP22531 72 aa3.32□□□□□ -1.88
NPIPB4-211ENST00000539318 SPRR2BP35325 72 aa3.32□□□□□ -1.88
NPIPB4-211ENST00000539318 SPRR2AP35326 72 aa3.32□□□□□ -1.88
NPIPB4-211ENST00000539318 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
NPIPB4-211ENST00000539318 MT1EP04732 61 aa3.31□□□□□ -1.88
NPIPB4-211ENST00000539318 KRTAP19-5Q3LI72 72 aa3.31□□□□□ -1.88
NPIPB4-211ENST00000539318 KRTAP25-1Q3LHN0 102 aa3.29□□□□□ -1.88
NPIPB4-211ENST00000539318 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
NPIPB4-211ENST00000539318 KRTAP19-3Q7Z4W3 81 aa3.23□□□□□ -1.89
NPIPB4-211ENST00000539318 ROMO1P60602 79 aa3.22□□□□□ -1.89
NPIPB4-211ENST00000539318 KRTAP2-3P0C7H8 128 aa3.21□□□□□ -1.9
NPIPB4-211ENST00000539318 SPRR2DP22532 72 aa3.21□□□□□ -1.9
NPIPB4-211ENST00000539318 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
NPIPB4-211ENST00000539318 KRTAP2-4Q9BYR9 128 aa3.21□□□□□ -1.9
NPIPB4-211ENST00000539318 PRO0628Q9UI54 55 aa3.21□□□□□ -1.9
NPIPB4-211ENST00000539318 MT1GP13640 62 aa3.2□□□□□ -1.9
NPIPB4-211ENST00000539318 MT1LQ93083 61 aa3.2□□□□□ -1.9
NPIPB4-211ENST00000539318 KRTAP12-3P60328 96 aa3.19□□□□□ -1.9
NPIPB4-211ENST00000539318 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
NPIPB4-211ENST00000539318 MT3P25713 68 aa3.15□□□□□ -1.91
NPIPB4-211ENST00000539318 MT1MQ8N339 61 aa3.13□□□□□ -1.91
NPIPB4-211ENST00000539318 KRTAP2-2Q9BYT5 123 aa3.13□□□□□ -1.91
NPIPB4-211ENST00000539318 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
NPIPB4-211ENST00000539318 PP632Q6XCG6 107 aa3.11□□□□□ -1.91
NPIPB4-211ENST00000539318 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
NPIPB4-211ENST00000539318 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
NPIPB4-211ENST00000539318 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
NPIPB4-211ENST00000539318 PRAC1Q96KF2 57 aa3□□□□□ -1.93
NPIPB4-211ENST00000539318 KTN1-AS1Q86SY8 53 aa2.99□□□□□ -1.93
NPIPB4-211ENST00000539318 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
NPIPB4-211ENST00000539318 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
NPIPB4-211ENST00000539318 NDUFAF8A1L188 74 aa2.92□□□□□ -1.94
NPIPB4-211ENST00000539318 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
NPIPB4-211ENST00000539318 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
NPIPB4-211ENST00000539318 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
NPIPB4-211ENST00000539318 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
NPIPB4-211ENST00000539318 MT4P47944 62 aa2.79□□□□□ -1.96
NPIPB4-211ENST00000539318 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
NPIPB4-211ENST00000539318 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
NPIPB4-211ENST00000539318 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
NPIPB4-211ENST00000539318 MT1AP04731 61 aa2.72□□□□□ -1.97
NPIPB4-211ENST00000539318 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
NPIPB4-211ENST00000539318 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
NPIPB4-211ENST00000539318 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
NPIPB4-211ENST00000539318 KRTAP6-1Q3LI64 71 aa2.7□□□□□ -1.98
NPIPB4-211ENST00000539318 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
NPIPB4-211ENST00000539318 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
NPIPB4-211ENST00000539318 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
NPIPB4-211ENST00000539318 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
NPIPB4-211ENST00000539318 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
NPIPB4-211ENST00000539318 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
NPIPB4-211ENST00000539318 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
NPIPB4-211ENST00000539318 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
NPIPB4-211ENST00000539318 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
NPIPB4-211ENST00000539318 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
NPIPB4-211ENST00000539318 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
NPIPB4-211ENST00000539318 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
NPIPB4-211ENST00000539318 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
NPIPB4-211ENST00000539318 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
NPIPB4-211ENST00000539318 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.07
NPIPB4-211ENST00000539318 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
NPIPB4-211ENST00000539318 INE1O15225 51 aa1.89□□□□□ -2.11
NPIPB4-211ENST00000539318 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
NPIPB4-211ENST00000539318 PRM1P04553 51 aa1.65□□□□□ -2.15
NPIPB4-211ENST00000539318 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
NPIPB4-211ENST00000539318 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
NPIPB4-211ENST00000539318 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
NPIPB4-211ENST00000539318 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 131.9 ms