RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 KRTAP19-6Q3LI70 58 aa5.73□□□□□ -1.49
C2CD3-213ENST00000539061 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
C2CD3-213ENST00000539061 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
C2CD3-213ENST00000539061 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
C2CD3-213ENST00000539061 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
C2CD3-213ENST00000539061 MT1GP13640 62 aa5.46□□□□□ -1.54
C2CD3-213ENST00000539061 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.54
C2CD3-213ENST00000539061 CRCT1Q9UGL9 99 aa5.46□□□□□ -1.54
C2CD3-213ENST00000539061 MACF1Q9UPN3 7388 aaKnown RBP5.35□□□□□ -1.55
C2CD3-213ENST00000539061 MT1MQ8N339 61 aa5.35□□□□□ -1.55
C2CD3-213ENST00000539061 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
C2CD3-213ENST00000539061 MUC12Q9UKN1 5478 aa5.3□□□□□ -1.56
C2CD3-213ENST00000539061 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
C2CD3-213ENST00000539061 SPRR2FQ96RM1 72 aa5.21□□□□□ -1.58
C2CD3-213ENST00000539061 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.58
C2CD3-213ENST00000539061 LCE3BQ5TA77 95 aa5.15□□□□□ -1.59
C2CD3-213ENST00000539061 MT1AP04731 61 aa5.1□□□□□ -1.59
C2CD3-213ENST00000539061 KRTAP4-9Q9BYQ8 210 aa5.09□□□□□ -1.59
C2CD3-213ENST00000539061 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
C2CD3-213ENST00000539061 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
C2CD3-213ENST00000539061 MDN1Q9NU22 5596 aa5.05□□□□□ -1.6
C2CD3-213ENST00000539061 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
C2CD3-213ENST00000539061 KRTAP5-9P26371 169 aa5□□□□□ -1.61
C2CD3-213ENST00000539061 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
C2CD3-213ENST00000539061 DSTQ03001 7570 aaKnown RBP4.98□□□□□ -1.61
C2CD3-213ENST00000539061 LCE3EQ5T5B0 92 aa4.96□□□□□ -1.61
C2CD3-213ENST00000539061 KRTAP6-1Q3LI64 71 aa4.94□□□□□ -1.62
C2CD3-213ENST00000539061 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
C2CD3-213ENST00000539061 PRM1P04553 51 aa4.9□□□□□ -1.62
C2CD3-213ENST00000539061 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.62
C2CD3-213ENST00000539061 KRTAP9-7A8MTY7 169 aa4.9□□□□□ -1.63
C2CD3-213ENST00000539061 SPRR2EP22531 72 aa4.9□□□□□ -1.63
C2CD3-213ENST00000539061 SPRR2BP35325 72 aa4.9□□□□□ -1.63
C2CD3-213ENST00000539061 SPRR2AP35326 72 aa4.9□□□□□ -1.63
C2CD3-213ENST00000539061 KRTAP6-3Q3LI67 103 aa4.88□□□□□ -1.63
C2CD3-213ENST00000539061 SPRR2DP22532 72 aa4.7□□□□□ -1.66
C2CD3-213ENST00000539061 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
C2CD3-213ENST00000539061 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
C2CD3-213ENST00000539061 NEBP20929 6669 aa4.52□□□□□ -1.69
C2CD3-213ENST00000539061 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
C2CD3-213ENST00000539061 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
C2CD3-213ENST00000539061 MT3P25713 68 aa4.37□□□□□ -1.71
C2CD3-213ENST00000539061 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
C2CD3-213ENST00000539061 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
C2CD3-213ENST00000539061 MT4P47944 62 aa4.17□□□□□ -1.74
C2CD3-213ENST00000539061 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
C2CD3-213ENST00000539061 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
C2CD3-213ENST00000539061 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
C2CD3-213ENST00000539061 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
C2CD3-213ENST00000539061 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
C2CD3-213ENST00000539061 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
C2CD3-213ENST00000539061 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
C2CD3-213ENST00000539061 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
C2CD3-213ENST00000539061 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
C2CD3-213ENST00000539061 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.82
C2CD3-213ENST00000539061 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
C2CD3-213ENST00000539061 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
C2CD3-213ENST00000539061 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
C2CD3-213ENST00000539061 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
C2CD3-213ENST00000539061 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
C2CD3-213ENST00000539061 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
C2CD3-213ENST00000539061 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
C2CD3-213ENST00000539061 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
C2CD3-213ENST00000539061 LCE1CQ5T751 118 aa3.28□□□□□ -1.89
C2CD3-213ENST00000539061 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
C2CD3-213ENST00000539061 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
C2CD3-213ENST00000539061 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
C2CD3-213ENST00000539061 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
C2CD3-213ENST00000539061 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
C2CD3-213ENST00000539061 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
C2CD3-213ENST00000539061 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
C2CD3-213ENST00000539061 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
C2CD3-213ENST00000539061 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
C2CD3-213ENST00000539061 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
C2CD3-213ENST00000539061 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
C2CD3-213ENST00000539061 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
C2CD3-213ENST00000539061 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 75.9 ms