RNA–Protein interactions for RNA: ENST00000539013.5

KNTC1-210, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 615 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-210ENST00000539013 SPRR2GQ9BYE4 73 aa2.52□□□□□ -2.01
KNTC1-210ENST00000539013 TNP1P09430 55 aa2.51□□□□□ -2.01
KNTC1-210ENST00000539013 PLAC4Q8WY50 150 aa2.49□□□□□ -2.01
KNTC1-210ENST00000539013 M0R2T5 61 aa2.48□□□□□ -2.01
KNTC1-210ENST00000539013 MT1HP80294 61 aa2.48□□□□□ -2.01
KNTC1-210ENST00000539013 PCLOQ9Y6V0 5065 aa2.48□□□□□ -2.01
KNTC1-210ENST00000539013 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
KNTC1-210ENST00000539013 MUC2Q02817 5179 aa2.44□□□□□ -2.02
KNTC1-210ENST00000539013 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
KNTC1-210ENST00000539013 MT2AP02795 61 aa2.43□□□□□ -2.02
KNTC1-210ENST00000539013 KRTAP10-10P60014 251 aa2.43□□□□□ -2.02
KNTC1-210ENST00000539013 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
KNTC1-210ENST00000539013 MT1FP04733 61 aa2.41□□□□□ -2.02
KNTC1-210ENST00000539013 LUZP6Q538Z0 58 aa2.39□□□□□ -2.03
KNTC1-210ENST00000539013 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
KNTC1-210ENST00000539013 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
KNTC1-210ENST00000539013 FAT4Q6V0I7 4981 aa2.36□□□□□ -2.03
KNTC1-210ENST00000539013 SPRR5A0A1B0GTR4 108 aa2.35□□□□□ -2.03
KNTC1-210ENST00000539013 MT1BP07438 61 aa2.35□□□□□ -2.03
KNTC1-210ENST00000539013 RNF213Q63HN8 5207 aa2.35□□□□□ -2.03
KNTC1-210ENST00000539013 KRTAP8-1Q8IUC2 63 aa2.32□□□□□ -2.04
KNTC1-210ENST00000539013 PRO2289Q9P1D8 64 aa2.32□□□□□ -2.04
KNTC1-210ENST00000539013 MT1XP80297 61 aa2.31□□□□□ -2.04
KNTC1-210ENST00000539013 UBR4Q5T4S7 5183 aa2.28□□□□□ -2.04
KNTC1-210ENST00000539013 KRTAP12-3P60328 96 aa2.24□□□□□ -2.05
KNTC1-210ENST00000539013 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.07
KNTC1-210ENST00000539013 KRTAP19-5Q3LI72 72 aa2.14□□□□□ -2.07
KNTC1-210ENST00000539013 INE1O15225 51 aa2.07□□□□□ -2.08
KNTC1-210ENST00000539013 KRTAP19-6Q3LI70 58 aa2.07□□□□□ -2.08
KNTC1-210ENST00000539013 KRTAP19-7Q3SYF9 63 aa2.06□□□□□ -2.08
KNTC1-210ENST00000539013 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
KNTC1-210ENST00000539013 USH2AO75445 5202 aa2.02□□□□□ -2.09
KNTC1-210ENST00000539013 MT1EP04732 61 aa2.02□□□□□ -2.09
KNTC1-210ENST00000539013 MT1LQ93083 61 aa2.01□□□□□ -2.09
KNTC1-210ENST00000539013 SSPOA2VEC9 5147 aa2□□□□□ -2.09
KNTC1-210ENST00000539013 KRTAP2-3P0C7H8 128 aa1.95□□□□□ -2.1
KNTC1-210ENST00000539013 KRTAP2-4Q9BYR9 128 aa1.95□□□□□ -2.1
KNTC1-210ENST00000539013 KRTAP2-1Q9BYU5 128 aa1.95□□□□□ -2.1
KNTC1-210ENST00000539013 KMT2DO14686 5537 aa1.93□□□□□ -2.1
KNTC1-210ENST00000539013 MT1GP13640 62 aa1.92□□□□□ -2.1
KNTC1-210ENST00000539013 KRTAP19-3Q7Z4W3 81 aa1.92□□□□□ -2.1
KNTC1-210ENST00000539013 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
KNTC1-210ENST00000539013 MT1MQ8N339 61 aa1.89□□□□□ -2.11
KNTC1-210ENST00000539013 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
KNTC1-210ENST00000539013 SPRR2FQ96RM1 72 aa1.82□□□□□ -2.12
KNTC1-210ENST00000539013 FCGBPQ9Y6R7 5405 aaPredicted RBP1.81□□□□□ -2.12
KNTC1-210ENST00000539013 CRCT1Q9UGL9 99 aa1.74□□□□□ -2.13
KNTC1-210ENST00000539013 MUC12Q9UKN1 5478 aa1.73□□□□□ -2.13
KNTC1-210ENST00000539013 MT1AP04731 61 aa1.73□□□□□ -2.13
KNTC1-210ENST00000539013 SPRR2EP22531 72 aa1.69□□□□□ -2.14
KNTC1-210ENST00000539013 SPRR2BP35325 72 aa1.69□□□□□ -2.14
KNTC1-210ENST00000539013 SPRR2AP35326 72 aa1.69□□□□□ -2.14
KNTC1-210ENST00000539013 KRTAP12-4P60329 112 aa1.68□□□□□ -2.14
KNTC1-210ENST00000539013 KRTAP6-1Q3LI64 71 aa1.68□□□□□ -2.14
KNTC1-210ENST00000539013 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
KNTC1-210ENST00000539013 FSIP2Q5CZC0 6907 aa1.67□□□□□ -2.14
KNTC1-210ENST00000539013 KRTAP6-3Q3LI67 103 aa1.64□□□□□ -2.15
KNTC1-210ENST00000539013 SPRR2DP22532 72 aa1.62□□□□□ -2.15
KNTC1-210ENST00000539013 MDN1Q9NU22 5596 aa1.58□□□□□ -2.16
KNTC1-210ENST00000539013 MACF1Q9UPN3 7388 aaKnown RBP1.58□□□□□ -2.16
KNTC1-210ENST00000539013 DSTQ03001 7570 aaKnown RBP1.5□□□□□ -2.17
KNTC1-210ENST00000539013 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
KNTC1-210ENST00000539013 SYNE1Q8NF91 8797 aaKnown RBP1.49□□□□□ -2.17
KNTC1-210ENST00000539013 SYNE2Q8WXH0 6885 aaKnown RBP1.49□□□□□ -2.17
KNTC1-210ENST00000539013 PRM1P04553 51 aa1.47□□□□□ -2.17
KNTC1-210ENST00000539013 KRTAP20-2Q3LI61 65 aa1.41□□□□□ -2.18
KNTC1-210ENST00000539013 MT4P47944 62 aa1.37□□□□□ -2.19
KNTC1-210ENST00000539013 KRTAP20-1Q3LI63 56 aa1.37□□□□□ -2.19
KNTC1-210ENST00000539013 NEBP20929 6669 aa1.33□□□□□ -2.2
KNTC1-210ENST00000539013 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
KNTC1-210ENST00000539013 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
KNTC1-210ENST00000539013 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
KNTC1-210ENST00000539013 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
KNTC1-210ENST00000539013 MUC5BQ9HC84 5762 aaPredicted RBP0.91□□□□□ -2.26
KNTC1-210ENST00000539013 PHGR1C9JFL3 82 aa0.9□□□□□ -2.27
KNTC1-210ENST00000539013 GPR98Q8WXG9 6306 aa0.89□□□□□ -2.27
KNTC1-210ENST00000539013 AHNAKQ09666 5890 aaKnown RBP0.84□□□□□ -2.27
KNTC1-210ENST00000539013 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms