RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
PLXNB3-209ENST00000538966 MT3P25713 68 aa4.39□□□□□ -1.71
PLXNB3-209ENST00000538966 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
PLXNB3-209ENST00000538966 KRTAP19-6Q3LI70 58 aa4.37□□□□□ -1.71
PLXNB3-209ENST00000538966 MT1MQ8N339 61 aa4.36□□□□□ -1.71
PLXNB3-209ENST00000538966 KRTAP9-6A0A140TA67 174 aa4.31□□□□□ -1.72
PLXNB3-209ENST00000538966 EPPK1P58107 5090 aaKnown RBP4.3□□□□□ -1.72
PLXNB3-209ENST00000538966 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
PLXNB3-209ENST00000538966 KRTAP20-1Q3LI63 56 aa4.26□□□□□ -1.73
PLXNB3-209ENST00000538966 LCE2AQ5TA79 106 aaPredicted RBP4.22□□□□□ -1.73
PLXNB3-209ENST00000538966 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
PLXNB3-209ENST00000538966 ABCA13Q86UQ4 5058 aa4.18□□□□□ -1.74
PLXNB3-209ENST00000538966 HMCN2Q8NDA2 5059 aa4.08□□□□□ -1.76
PLXNB3-209ENST00000538966 KRTAP19-7Q3SYF9 63 aa4.07□□□□□ -1.76
PLXNB3-209ENST00000538966 FAT4Q6V0I7 4981 aa4.06□□□□□ -1.76
PLXNB3-209ENST00000538966 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
PLXNB3-209ENST00000538966 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
PLXNB3-209ENST00000538966 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
PLXNB3-209ENST00000538966 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
PLXNB3-209ENST00000538966 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
PLXNB3-209ENST00000538966 MT1AP04731 61 aa4.03□□□□□ -1.76
PLXNB3-209ENST00000538966 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
PLXNB3-209ENST00000538966 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
PLXNB3-209ENST00000538966 KRTAP2-1Q9BYU5 128 aa4.02□□□□□ -1.77
PLXNB3-209ENST00000538966 MUC2Q02817 5179 aa4.01□□□□□ -1.77
PLXNB3-209ENST00000538966 RNF213Q63HN8 5207 aa4□□□□□ -1.77
PLXNB3-209ENST00000538966 SYNE2Q8WXH0 6885 aaKnown RBP3.92□□□□□ -1.78
PLXNB3-209ENST00000538966 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
PLXNB3-209ENST00000538966 KRTAP6-1Q3LI64 71 aa3.86□□□□□ -1.79
PLXNB3-209ENST00000538966 KRTAP6-3Q3LI67 103 aa3.85□□□□□ -1.79
PLXNB3-209ENST00000538966 FSIP2Q5CZC0 6907 aa3.83□□□□□ -1.8
PLXNB3-209ENST00000538966 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
PLXNB3-209ENST00000538966 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
PLXNB3-209ENST00000538966 UBR4Q5T4S7 5183 aa3.79□□□□□ -1.8
PLXNB3-209ENST00000538966 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
PLXNB3-209ENST00000538966 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
PLXNB3-209ENST00000538966 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.75□□□□□ -1.81
PLXNB3-209ENST00000538966 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
PLXNB3-209ENST00000538966 KMT2DO14686 5537 aa3.67□□□□□ -1.82
PLXNB3-209ENST00000538966 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
PLXNB3-209ENST00000538966 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.84
PLXNB3-209ENST00000538966 KRTAP5-9P26371 169 aa3.32□□□□□ -1.88
PLXNB3-209ENST00000538966 USH2AO75445 5202 aa3.31□□□□□ -1.88
PLXNB3-209ENST00000538966 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
PLXNB3-209ENST00000538966 FCGBPQ9Y6R7 5405 aaPredicted RBP3.28□□□□□ -1.88
PLXNB3-209ENST00000538966 KRTAP20-2Q3LI61 65 aa3.25□□□□□ -1.89
PLXNB3-209ENST00000538966 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.91
PLXNB3-209ENST00000538966 SSPOA2VEC9 5147 aa3.15□□□□□ -1.91
PLXNB3-209ENST00000538966 MACF1Q9UPN3 7388 aaKnown RBP3.14□□□□□ -1.91
PLXNB3-209ENST00000538966 NEBP20929 6669 aa3.13□□□□□ -1.91
PLXNB3-209ENST00000538966 DSTQ03001 7570 aaKnown RBP3.13□□□□□ -1.91
PLXNB3-209ENST00000538966 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
PLXNB3-209ENST00000538966 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
PLXNB3-209ENST00000538966 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
PLXNB3-209ENST00000538966 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
PLXNB3-209ENST00000538966 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
PLXNB3-209ENST00000538966 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
PLXNB3-209ENST00000538966 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
PLXNB3-209ENST00000538966 MDN1Q9NU22 5596 aa2.64□□□□□ -1.99
PLXNB3-209ENST00000538966 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
PLXNB3-209ENST00000538966 KRTAP5-3Q6L8H2 238 aa2.54□□□□□ -2
PLXNB3-209ENST00000538966 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
PLXNB3-209ENST00000538966 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
PLXNB3-209ENST00000538966 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
PLXNB3-209ENST00000538966 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
PLXNB3-209ENST00000538966 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
PLXNB3-209ENST00000538966 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
PLXNB3-209ENST00000538966 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
PLXNB3-209ENST00000538966 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
PLXNB3-209ENST00000538966 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
PLXNB3-209ENST00000538966 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
PLXNB3-209ENST00000538966 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
PLXNB3-209ENST00000538966 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
PLXNB3-209ENST00000538966 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
PLXNB3-209ENST00000538966 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
PLXNB3-209ENST00000538966 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
PLXNB3-209ENST00000538966 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 137.5 ms