RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 MT1LQ93083 61 aa6.25□□□□□ -1.41
SFSWAP-207ENST00000538548 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
SFSWAP-207ENST00000538548 MT1EP04732 61 aa6.18□□□□□ -1.42
SFSWAP-207ENST00000538548 MUC12Q9UKN1 5478 aa6.16□□□□□ -1.42
SFSWAP-207ENST00000538548 MACF1Q9UPN3 7388 aaKnown RBP6.14□□□□□ -1.43
SFSWAP-207ENST00000538548 SYNE2Q8WXH0 6885 aaKnown RBP6.08□□□□□ -1.44
SFSWAP-207ENST00000538548 KRTAP9-2Q9BYQ4 174 aa6.06□□□□□ -1.44
SFSWAP-207ENST00000538548 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
SFSWAP-207ENST00000538548 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
SFSWAP-207ENST00000538548 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
SFSWAP-207ENST00000538548 MT1GP13640 62 aa5.86□□□□□ -1.47
SFSWAP-207ENST00000538548 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
SFSWAP-207ENST00000538548 MDN1Q9NU22 5596 aa5.83□□□□□ -1.48
SFSWAP-207ENST00000538548 CRCT1Q9UGL9 99 aa5.83□□□□□ -1.48
SFSWAP-207ENST00000538548 SPRR2FQ96RM1 72 aa5.76□□□□□ -1.49
SFSWAP-207ENST00000538548 MT1MQ8N339 61 aa5.74□□□□□ -1.49
SFSWAP-207ENST00000538548 KRTAP19-3Q7Z4W3 81 aa5.68□□□□□ -1.5
SFSWAP-207ENST00000538548 KRTAP9-6A0A140TA67 174 aa5.61□□□□□ -1.51
SFSWAP-207ENST00000538548 LCE3BQ5TA77 95 aa5.54□□□□□ -1.52
SFSWAP-207ENST00000538548 MT1AP04731 61 aa5.51□□□□□ -1.53
SFSWAP-207ENST00000538548 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
SFSWAP-207ENST00000538548 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
SFSWAP-207ENST00000538548 SYNE1Q8NF91 8797 aaKnown RBP5.39□□□□□ -1.55
SFSWAP-207ENST00000538548 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.39□□□□□ -1.55
SFSWAP-207ENST00000538548 LCE3DQ9BYE3 92 aa5.38□□□□□ -1.55
SFSWAP-207ENST00000538548 LCE1AQ5T7P2 110 aa5.37□□□□□ -1.55
SFSWAP-207ENST00000538548 KRTAP5-9P26371 169 aa5.36□□□□□ -1.55
SFSWAP-207ENST00000538548 LCE3EQ5T5B0 92 aa5.36□□□□□ -1.55
SFSWAP-207ENST00000538548 SPRR2EP22531 72 aa5.34□□□□□ -1.55
SFSWAP-207ENST00000538548 SPRR2BP35325 72 aa5.34□□□□□ -1.55
SFSWAP-207ENST00000538548 SPRR2AP35326 72 aa5.34□□□□□ -1.55
SFSWAP-207ENST00000538548 KRTAP5-5Q701N2 237 aaPredicted RBP5.32□□□□□ -1.56
SFSWAP-207ENST00000538548 KRTAP9-7A8MTY7 169 aa5.31□□□□□ -1.56
SFSWAP-207ENST00000538548 PRM1P04553 51 aa5.31□□□□□ -1.56
SFSWAP-207ENST00000538548 KRTAP6-1Q3LI64 71 aa5.3□□□□□ -1.56
SFSWAP-207ENST00000538548 KRTAP6-3Q3LI67 103 aa5.15□□□□□ -1.58
SFSWAP-207ENST00000538548 SPRR2DP22532 72 aa5.11□□□□□ -1.59
SFSWAP-207ENST00000538548 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
SFSWAP-207ENST00000538548 NEBP20929 6669 aa5.04□□□□□ -1.6
SFSWAP-207ENST00000538548 KRTAP6-2Q3LI66 62 aa5.02□□□□□ -1.61
SFSWAP-207ENST00000538548 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
SFSWAP-207ENST00000538548 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
SFSWAP-207ENST00000538548 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
SFSWAP-207ENST00000538548 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
SFSWAP-207ENST00000538548 MT3P25713 68 aa4.68□□□□□ -1.66
SFSWAP-207ENST00000538548 MT4P47944 62 aa4.62□□□□□ -1.67
SFSWAP-207ENST00000538548 KRTAP4-6Q9BYQ5 205 aa4.58□□□□□ -1.68
SFSWAP-207ENST00000538548 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
SFSWAP-207ENST00000538548 HMCN1Q96RW7 5635 aa4.55□□□□□ -1.68
SFSWAP-207ENST00000538548 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
SFSWAP-207ENST00000538548 KRTAP20-1Q3LI63 56 aa4.48□□□□□ -1.69
SFSWAP-207ENST00000538548 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
SFSWAP-207ENST00000538548 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
SFSWAP-207ENST00000538548 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
SFSWAP-207ENST00000538548 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
SFSWAP-207ENST00000538548 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
SFSWAP-207ENST00000538548 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
SFSWAP-207ENST00000538548 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
SFSWAP-207ENST00000538548 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
SFSWAP-207ENST00000538548 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
SFSWAP-207ENST00000538548 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
SFSWAP-207ENST00000538548 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
SFSWAP-207ENST00000538548 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
SFSWAP-207ENST00000538548 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
SFSWAP-207ENST00000538548 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
SFSWAP-207ENST00000538548 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
SFSWAP-207ENST00000538548 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
SFSWAP-207ENST00000538548 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
SFSWAP-207ENST00000538548 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
SFSWAP-207ENST00000538548 KRTAP21-1Q3LI58 79 aa3.41□□□□□ -1.86
SFSWAP-207ENST00000538548 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
SFSWAP-207ENST00000538548 KRTAP5-7Q6L8G8 165 aa3.26□□□□□ -1.89
SFSWAP-207ENST00000538548 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
SFSWAP-207ENST00000538548 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
SFSWAP-207ENST00000538548 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
SFSWAP-207ENST00000538548 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
SFSWAP-207ENST00000538548 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
SFSWAP-207ENST00000538548 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms