RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 SYNE2Q8WXH0 6885 aaKnown RBP5.99□□□□□ -1.45
SNX17-210ENST00000537606 INE1O15225 51 aa5.94□□□□□ -1.46
SNX17-210ENST00000537606 SPRR2FQ96RM1 72 aa5.94□□□□□ -1.46
SNX17-210ENST00000537606 CRCT1Q9UGL9 99 aa5.93□□□□□ -1.46
SNX17-210ENST00000537606 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
SNX17-210ENST00000537606 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.46
SNX17-210ENST00000537606 KRTAP19-3Q7Z4W3 81 aa5.89□□□□□ -1.47
SNX17-210ENST00000537606 MT1GP13640 62 aa5.84□□□□□ -1.48
SNX17-210ENST00000537606 MT1MQ8N339 61 aa5.84□□□□□ -1.48
SNX17-210ENST00000537606 DSTQ03001 7570 aaKnown RBP5.82□□□□□ -1.48
SNX17-210ENST00000537606 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
SNX17-210ENST00000537606 MDN1Q9NU22 5596 aa5.75□□□□□ -1.49
SNX17-210ENST00000537606 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
SNX17-210ENST00000537606 KRTAP2-3P0C7H8 128 aa5.67□□□□□ -1.5
SNX17-210ENST00000537606 KRTAP2-4Q9BYR9 128 aa5.67□□□□□ -1.5
SNX17-210ENST00000537606 KRTAP2-1Q9BYU5 128 aa5.67□□□□□ -1.5
SNX17-210ENST00000537606 KRTAP5-9P26371 169 aa5.62□□□□□ -1.51
SNX17-210ENST00000537606 LCE1AQ5T7P2 110 aa5.58□□□□□ -1.52
SNX17-210ENST00000537606 SPRR2EP22531 72 aa5.52□□□□□ -1.53
SNX17-210ENST00000537606 SPRR2BP35325 72 aa5.52□□□□□ -1.53
SNX17-210ENST00000537606 SPRR2AP35326 72 aa5.52□□□□□ -1.53
SNX17-210ENST00000537606 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.48□□□□□ -1.53
SNX17-210ENST00000537606 KRTAP9-6A0A140TA67 174 aa5.46□□□□□ -1.54
SNX17-210ENST00000537606 KRTAP6-3Q3LI67 103 aa5.37□□□□□ -1.55
SNX17-210ENST00000537606 SPRR2DP22532 72 aa5.28□□□□□ -1.56
SNX17-210ENST00000537606 KRTAP9-4Q9BYQ2 154 aa5.25□□□□□ -1.57
SNX17-210ENST00000537606 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
SNX17-210ENST00000537606 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
SNX17-210ENST00000537606 LCE3BQ5TA77 95 aa5.21□□□□□ -1.58
SNX17-210ENST00000537606 KRTAP5-5Q701N2 237 aaPredicted RBP5.18□□□□□ -1.58
SNX17-210ENST00000537606 MT1AP04731 61 aa5.16□□□□□ -1.58
SNX17-210ENST00000537606 NEBP20929 6669 aa5.09□□□□□ -1.59
SNX17-210ENST00000537606 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
SNX17-210ENST00000537606 KRTAP9-9Q9BYP9 154 aa5.08□□□□□ -1.6
SNX17-210ENST00000537606 KRTAP9-7A8MTY7 169 aa5.07□□□□□ -1.6
SNX17-210ENST00000537606 LCE4AQ5TA78 99 aa5.01□□□□□ -1.61
SNX17-210ENST00000537606 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
SNX17-210ENST00000537606 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
SNX17-210ENST00000537606 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
SNX17-210ENST00000537606 KRTAP6-2Q3LI66 62 aa4.77□□□□□ -1.65
SNX17-210ENST00000537606 KRTAP5-4Q6L8H1 288 aa4.76□□□□□ -1.65
SNX17-210ENST00000537606 LCE1FQ5T754 118 aa4.73□□□□□ -1.65
SNX17-210ENST00000537606 MT4P47944 62 aa4.69□□□□□ -1.66
SNX17-210ENST00000537606 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
SNX17-210ENST00000537606 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
SNX17-210ENST00000537606 MT3P25713 68 aa4.66□□□□□ -1.66
SNX17-210ENST00000537606 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.67
SNX17-210ENST00000537606 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
SNX17-210ENST00000537606 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
SNX17-210ENST00000537606 KRTAP20-1Q3LI63 56 aa4.48□□□□□ -1.69
SNX17-210ENST00000537606 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
SNX17-210ENST00000537606 PRM1P04553 51 aa4.38□□□□□ -1.71
SNX17-210ENST00000537606 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
SNX17-210ENST00000537606 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
SNX17-210ENST00000537606 KRTAP4-12Q9BQ66 201 aa4.2□□□□□ -1.74
SNX17-210ENST00000537606 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
SNX17-210ENST00000537606 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
SNX17-210ENST00000537606 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
SNX17-210ENST00000537606 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.8
SNX17-210ENST00000537606 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
SNX17-210ENST00000537606 AHNAK2Q8IVF2 5795 aa3.76□□□□□ -1.81
SNX17-210ENST00000537606 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
SNX17-210ENST00000537606 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
SNX17-210ENST00000537606 KRTAP5-8O75690 187 aa3.68□□□□□ -1.82
SNX17-210ENST00000537606 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
SNX17-210ENST00000537606 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
SNX17-210ENST00000537606 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
SNX17-210ENST00000537606 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
SNX17-210ENST00000537606 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.87
SNX17-210ENST00000537606 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
SNX17-210ENST00000537606 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
SNX17-210ENST00000537606 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
SNX17-210ENST00000537606 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
SNX17-210ENST00000537606 PHGR1C9JFL3 82 aa2.78□□□□□ -1.97
SNX17-210ENST00000537606 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
SNX17-210ENST00000537606 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
SNX17-210ENST00000537606 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 83 ms