RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 LCE3AQ5TA76 89 aa1.7□□□□□ -2.14
SEC23A-202ENST00000537403 FCGBPQ9Y6R7 5405 aaPredicted RBP1.69□□□□□ -2.14
SEC23A-202ENST00000537403 MT2AP02795 61 aa1.67□□□□□ -2.14
SEC23A-202ENST00000537403 KRTAP19-6Q3LI70 58 aa1.67□□□□□ -2.14
SEC23A-202ENST00000537403 KRTAP8-1Q8IUC2 63 aa1.66□□□□□ -2.14
SEC23A-202ENST00000537403 SPRR2GQ9BYE4 73 aa1.64□□□□□ -2.15
SEC23A-202ENST00000537403 MT1FP04733 61 aa1.64□□□□□ -2.15
SEC23A-202ENST00000537403 MACF1Q9UPN3 7388 aaKnown RBP1.63□□□□□ -2.15
SEC23A-202ENST00000537403 FSIP2Q5CZC0 6907 aa1.61□□□□□ -2.15
SEC23A-202ENST00000537403 KRTAP6-3Q3LI67 103 aa1.61□□□□□ -2.15
SEC23A-202ENST00000537403 KRTAP10-7P60409 375 aaPredicted RBP1.61□□□□□ -2.15
SEC23A-202ENST00000537403 INE1O15225 51 aa1.6□□□□□ -2.15
SEC23A-202ENST00000537403 OBSCNQ5VST9 7968 aa1.59□□□□□ -2.15
SEC23A-202ENST00000537403 MT3P25713 68 aa1.58□□□□□ -2.16
SEC23A-202ENST00000537403 KRTAP5-9P26371 169 aa1.58□□□□□ -2.16
SEC23A-202ENST00000537403 NEBP20929 6669 aa1.58□□□□□ -2.16
SEC23A-202ENST00000537403 SYNE2Q8WXH0 6885 aaKnown RBP1.57□□□□□ -2.16
SEC23A-202ENST00000537403 LCE3EQ5T5B0 92 aa1.57□□□□□ -2.16
SEC23A-202ENST00000537403 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
SEC23A-202ENST00000537403 KRTAP10-5P60370 271 aa1.57□□□□□ -2.16
SEC23A-202ENST00000537403 SPRR2FQ96RM1 72 aa1.56□□□□□ -2.16
SEC23A-202ENST00000537403 KRTAP19-5Q3LI72 72 aa1.54□□□□□ -2.16
SEC23A-202ENST00000537403 KRTAP19-8Q3LI54 63 aa1.54□□□□□ -2.16
SEC23A-202ENST00000537403 MUC12Q9UKN1 5478 aa1.53□□□□□ -2.16
SEC23A-202ENST00000537403 SYNE1Q8NF91 8797 aaKnown RBP1.53□□□□□ -2.16
SEC23A-202ENST00000537403 MT1BP07438 61 aa1.51□□□□□ -2.17
SEC23A-202ENST00000537403 MT1XP80297 61 aa1.48□□□□□ -2.17
SEC23A-202ENST00000537403 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
SEC23A-202ENST00000537403 KRTAP5-2Q701N4 177 aa1.45□□□□□ -2.18
SEC23A-202ENST00000537403 MDN1Q9NU22 5596 aa1.45□□□□□ -2.18
SEC23A-202ENST00000537403 LCE1EQ5T753 118 aa1.45□□□□□ -2.18
SEC23A-202ENST00000537403 SPRR2EP22531 72 aa1.45□□□□□ -2.18
SEC23A-202ENST00000537403 SPRR2BP35325 72 aa1.45□□□□□ -2.18
SEC23A-202ENST00000537403 SPRR2AP35326 72 aa1.45□□□□□ -2.18
SEC23A-202ENST00000537403 KRTAP20-1Q3LI63 56 aa1.45□□□□□ -2.18
SEC23A-202ENST00000537403 KMT2DO14686 5537 aa1.44□□□□□ -2.18
SEC23A-202ENST00000537403 KRTAP2-3P0C7H8 128 aa1.42□□□□□ -2.18
SEC23A-202ENST00000537403 KRTAP2-4Q9BYR9 128 aa1.42□□□□□ -2.18
SEC23A-202ENST00000537403 MT1GP13640 62 aa1.41□□□□□ -2.18
SEC23A-202ENST00000537403 KRTAP9-6A8MVA2 160 aa1.41□□□□□ -2.18
SEC23A-202ENST00000537403 KRTAP5-4Q6L8H1 288 aa1.4□□□□□ -2.19
SEC23A-202ENST00000537403 SPRR2DP22532 72 aa1.39□□□□□ -2.19
SEC23A-202ENST00000537403 KRTAP12-4P60329 112 aa1.37□□□□□ -2.19
SEC23A-202ENST00000537403 KRTAP2-1Q9BYU5 128 aa1.37□□□□□ -2.19
SEC23A-202ENST00000537403 KRTAP19-3Q7Z4W3 81 aa1.36□□□□□ -2.19
SEC23A-202ENST00000537403 MUC19Q7Z5P9 8384 aa1.36□□□□□ -2.19
SEC23A-202ENST00000537403 MT1LQ93083 61 aa1.34□□□□□ -2.19
SEC23A-202ENST00000537403 SPRR5A0A1B0GTR4 108 aa1.34□□□□□ -2.19
SEC23A-202ENST00000537403 MT1EP04732 61 aa1.34□□□□□ -2.19
SEC23A-202ENST00000537403 KRTAP5-1Q6L8H4 278 aa1.33□□□□□ -2.2
SEC23A-202ENST00000537403 LCE3DQ9BYE3 92 aa1.32□□□□□ -2.2
SEC23A-202ENST00000537403 DSTQ03001 7570 aaKnown RBP1.3□□□□□ -2.2
SEC23A-202ENST00000537403 MT1MQ8N339 61 aa1.29□□□□□ -2.2
SEC23A-202ENST00000537403 KRTAP19-7Q3SYF9 63 aa1.27□□□□□ -2.21
SEC23A-202ENST00000537403 KRTAP4-3Q9BYR4 195 aa1.27□□□□□ -2.21
SEC23A-202ENST00000537403 KRTAP5-10Q6L8G5 202 aa1.26□□□□□ -2.21
SEC23A-202ENST00000537403 MT4P47944 62 aa1.25□□□□□ -2.21
SEC23A-202ENST00000537403 KRTAP4-4Q9BYR3 166 aa1.24□□□□□ -2.21
SEC23A-202ENST00000537403 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
SEC23A-202ENST00000537403 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
SEC23A-202ENST00000537403 KRTAP5-5Q701N2 237 aaPredicted RBP1.21□□□□□ -2.22
SEC23A-202ENST00000537403 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
SEC23A-202ENST00000537403 MT1AP04731 61 aa1.19□□□□□ -2.22
SEC23A-202ENST00000537403 LCE1BQ5T7P3 118 aa1.18□□□□□ -2.22
SEC23A-202ENST00000537403 GPR98Q8WXG9 6306 aa1.16□□□□□ -2.22
SEC23A-202ENST00000537403 PRM1P04553 51 aa1.15□□□□□ -2.23
SEC23A-202ENST00000537403 KRTAP5-8O75690 187 aa1.13□□□□□ -2.23
SEC23A-202ENST00000537403 KRTAP6-1Q3LI64 71 aa1.13□□□□□ -2.23
SEC23A-202ENST00000537403 KRTAP20-2Q3LI61 65 aa1.12□□□□□ -2.23
SEC23A-202ENST00000537403 KRTAP6-2Q3LI66 62 aa1.11□□□□□ -2.23
SEC23A-202ENST00000537403 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
SEC23A-202ENST00000537403 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
SEC23A-202ENST00000537403 LCE1CQ5T751 118 aa0.98□□□□□ -2.25
SEC23A-202ENST00000537403 KRTAP21-2Q3LI59 83 aa0.75□□□□□ -2.29
SEC23A-202ENST00000537403 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
SEC23A-202ENST00000537403 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
SEC23A-202ENST00000537403 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 7.9 ms