RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 KRTAP19-3Q7Z4W3 81 aa4.67□□□□□ -1.66
VPS37C-203ENST00000536000 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
VPS37C-203ENST00000536000 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
VPS37C-203ENST00000536000 A6NED7 52 aa4.63□□□□□ -1.67
VPS37C-203ENST00000536000 CDC42SE1Q9NRR8 79 aa4.63□□□□□ -1.67
VPS37C-203ENST00000536000 K7ERS5 55 aa4.62□□□□□ -1.67
VPS37C-203ENST00000536000 MT1GP13640 62 aa4.6□□□□□ -1.67
VPS37C-203ENST00000536000 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
VPS37C-203ENST00000536000 MT1LQ93083 61 aa4.54□□□□□ -1.68
VPS37C-203ENST00000536000 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
VPS37C-203ENST00000536000 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
VPS37C-203ENST00000536000 MT1MQ8N339 61 aa4.49□□□□□ -1.69
VPS37C-203ENST00000536000 KTN1-AS1Q86SY8 53 aa4.48□□□□□ -1.69
VPS37C-203ENST00000536000 DSTQ03001 7570 aaKnown RBP4.47□□□□□ -1.69
VPS37C-203ENST00000536000 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
VPS37C-203ENST00000536000 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
VPS37C-203ENST00000536000 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
VPS37C-203ENST00000536000 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
VPS37C-203ENST00000536000 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
VPS37C-203ENST00000536000 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
VPS37C-203ENST00000536000 ROMO1P60602 79 aa4.29□□□□□ -1.72
VPS37C-203ENST00000536000 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
VPS37C-203ENST00000536000 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
VPS37C-203ENST00000536000 MT4P47944 62 aa4.23□□□□□ -1.73
VPS37C-203ENST00000536000 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
VPS37C-203ENST00000536000 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
VPS37C-203ENST00000536000 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
VPS37C-203ENST00000536000 GPR98Q8WXG9 6306 aa4.19□□□□□ -1.74
VPS37C-203ENST00000536000 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
VPS37C-203ENST00000536000 KRTAP4-6Q9BYQ5 205 aa4.11□□□□□ -1.75
VPS37C-203ENST00000536000 LOC100996750A0A140TA64 210 aa4.09□□□□□ -1.75
VPS37C-203ENST00000536000 KRTAP5-5Q701N2 237 aaPredicted RBP4.08□□□□□ -1.76
VPS37C-203ENST00000536000 HMCN1Q96RW7 5635 aa4.04□□□□□ -1.76
VPS37C-203ENST00000536000 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
VPS37C-203ENST00000536000 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
VPS37C-203ENST00000536000 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
VPS37C-203ENST00000536000 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.79
VPS37C-203ENST00000536000 MT1AP04731 61 aa3.87□□□□□ -1.79
VPS37C-203ENST00000536000 KRTAP5-10Q6L8G5 202 aa3.87□□□□□ -1.79
VPS37C-203ENST00000536000 AHNAK2Q8IVF2 5795 aa3.86□□□□□ -1.79
VPS37C-203ENST00000536000 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
VPS37C-203ENST00000536000 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
VPS37C-203ENST00000536000 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
VPS37C-203ENST00000536000 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
VPS37C-203ENST00000536000 KRTAP5-7Q6L8G8 165 aa3.72□□□□□ -1.81
VPS37C-203ENST00000536000 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
VPS37C-203ENST00000536000 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
VPS37C-203ENST00000536000 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
VPS37C-203ENST00000536000 MT3P25713 68 aa3.56□□□□□ -1.84
VPS37C-203ENST00000536000 H3BS24 57 aa3.53□□□□□ -1.84
VPS37C-203ENST00000536000 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
VPS37C-203ENST00000536000 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
VPS37C-203ENST00000536000 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
VPS37C-203ENST00000536000 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
VPS37C-203ENST00000536000 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
VPS37C-203ENST00000536000 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
VPS37C-203ENST00000536000 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
VPS37C-203ENST00000536000 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
VPS37C-203ENST00000536000 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
VPS37C-203ENST00000536000 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
VPS37C-203ENST00000536000 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
VPS37C-203ENST00000536000 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
VPS37C-203ENST00000536000 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
VPS37C-203ENST00000536000 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
VPS37C-203ENST00000536000 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
VPS37C-203ENST00000536000 INE1O15225 51 aa2.93□□□□□ -1.94
VPS37C-203ENST00000536000 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
VPS37C-203ENST00000536000 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
VPS37C-203ENST00000536000 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
VPS37C-203ENST00000536000 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
VPS37C-203ENST00000536000 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
VPS37C-203ENST00000536000 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
VPS37C-203ENST00000536000 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
VPS37C-203ENST00000536000 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
VPS37C-203ENST00000536000 PRM1P04553 51 aa2.19□□□□□ -2.06
VPS37C-203ENST00000536000 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
VPS37C-203ENST00000536000 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
VPS37C-203ENST00000536000 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 183 ms