RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-208	ENST00000535934	KRTAP4-8	Q9BYQ9	185 aa		5.73	□□□□□ -1.49
POLE-208	ENST00000535934	INE1	O15225	51 aa		5.72	□□□□□ -1.49
POLE-208	ENST00000535934	SPRR2E	P22531	72 aa		5.72	□□□□□ -1.49
POLE-208	ENST00000535934	SPRR2B	P35325	72 aa		5.72	□□□□□ -1.49
POLE-208	ENST00000535934	SPRR2A	P35326	72 aa		5.72	□□□□□ -1.49
POLE-208	ENST00000535934	KRTAP2-3	P0C7H8	128 aa		5.69	□□□□□ -1.5
POLE-208	ENST00000535934	KRTAP2-4	Q9BYR9	128 aa		5.69	□□□□□ -1.5
POLE-208	ENST00000535934	KRTAP10-7	P60409	375 aa	Predicted RBP	5.67	□□□□□ -1.5
POLE-208	ENST00000535934	LCE1A	Q5T7P2	110 aa		5.67	□□□□□ -1.5
POLE-208	ENST00000535934	KRTAP10-12	P60413	245 aa		5.61	□□□□□ -1.51
POLE-208	ENST00000535934	SPRR2D	P22532	72 aa		5.52	□□□□□ -1.53
POLE-208	ENST00000535934	KRTAP2-2	Q9BYT5	123 aa		5.5	□□□□□ -1.53
POLE-208	ENST00000535934	KRTAP2-1	Q9BYU5	128 aa		5.5	□□□□□ -1.53
POLE-208	ENST00000535934	LCE3B	Q5TA77	95 aa		5.38	□□□□□ -1.55
POLE-208	ENST00000535934	KRTAP19-7	Q3SYF9	63 aa		5.32	□□□□□ -1.56
POLE-208	ENST00000535934	MT1E	P04732	61 aa		5.25	□□□□□ -1.57
POLE-208	ENST00000535934	LCE5A	Q5TCM9	118 aa		5.25	□□□□□ -1.57
POLE-208	ENST00000535934	DST	Q03001	7570 aa	Known RBP	5.24	□□□□□ -1.57
POLE-208	ENST00000535934	LCE3A	Q5TA76	89 aa		5.23	□□□□□ -1.57
POLE-208	ENST00000535934	KRTAP19-3	Q7Z4W3	81 aa		5.21	□□□□□ -1.58
POLE-208	ENST00000535934	KRTAP19-5	Q3LI72	72 aa		5.15	□□□□□ -1.59
POLE-208	ENST00000535934	KRTAP4-9	Q9BYQ8	210 aa		5.08	□□□□□ -1.6
POLE-208	ENST00000535934	MT1G	P13640	62 aa		5.06	□□□□□ -1.6
POLE-208	ENST00000535934	KRTAP12-3	P60328	96 aa		5.06	□□□□□ -1.6
POLE-208	ENST00000535934	MT1L	Q93083	61 aa		5.01	□□□□□ -1.61
POLE-208	ENST00000535934	MT1M	Q8N339	61 aa		5	□□□□□ -1.61
POLE-208	ENST00000535934	GPR98	Q8WXG9	6306 aa		4.95	□□□□□ -1.62
POLE-208	ENST00000535934	KRTAP4-3	Q9BYR4	195 aa		4.95	□□□□□ -1.62
POLE-208	ENST00000535934	LCE1D	Q5T752	114 aa		4.94	□□□□□ -1.62
POLE-208	ENST00000535934	HMCN1	Q96RW7	5635 aa		4.89	□□□□□ -1.63
POLE-208	ENST00000535934	MT4	P47944	62 aa		4.87	□□□□□ -1.63
POLE-208	ENST00000535934	LCE4A	Q5TA78	99 aa		4.86	□□□□□ -1.63
POLE-208	ENST00000535934	KRTAP19-4	Q3LI73	84 aa		4.82	□□□□□ -1.64
POLE-208	ENST00000535934	KRTAP4-7	Q9BYR0	210 aa		4.82	□□□□□ -1.64
POLE-208	ENST00000535934	KRTAP5-4	Q6L8H1	288 aa		4.81	□□□□□ -1.64
POLE-208	ENST00000535934	LCE3C	Q5T5A8	94 aa		4.79	□□□□□ -1.64
POLE-208	ENST00000535934	KRTAP4-6	Q9BYQ5	205 aa		4.76	□□□□□ -1.65
POLE-208	ENST00000535934	AHNAK2	Q8IVF2	5795 aa		4.69	□□□□□ -1.66
POLE-208	ENST00000535934	KRTAP5-10	Q6L8G5	202 aa		4.62	□□□□□ -1.67
POLE-208	ENST00000535934	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.61	□□□□□ -1.67
POLE-208	ENST00000535934	LOC100996750	A0A140TA64	210 aa		4.56	□□□□□ -1.68
POLE-208	ENST00000535934	KRTAP20-2	Q3LI61	65 aa		4.54	□□□□□ -1.68
POLE-208	ENST00000535934	KRTAP5-3	Q6L8H2	238 aa		4.49	□□□□□ -1.69
POLE-208	ENST00000535934	KRTAP9-6	A8MVA2	160 aa		4.45	□□□□□ -1.7
POLE-208	ENST00000535934	KRTAP12-4	P60329	112 aa		4.44	□□□□□ -1.7
POLE-208	ENST00000535934	KRTAP5-7	Q6L8G8	165 aa		4.43	□□□□□ -1.7
POLE-208	ENST00000535934	SYNE1	Q8NF91	8797 aa	Known RBP	4.42	□□□□□ -1.7
POLE-208	ENST00000535934	KRTAP6-1	Q3LI64	71 aa		4.26	□□□□□ -1.73
POLE-208	ENST00000535934	MT1A	P04731	61 aa		4.23	□□□□□ -1.73
POLE-208	ENST00000535934	KRTAP5-2	Q701N4	177 aa		4.2	□□□□□ -1.74
POLE-208	ENST00000535934	KRTAP4-11	Q9BYQ6	195 aa		4.17	□□□□□ -1.74
POLE-208	ENST00000535934	KRTAP9-4	Q9BYQ2	154 aa		4.11	□□□□□ -1.75
POLE-208	ENST00000535934	KRTAP6-2	Q3LI66	62 aa		4.07	□□□□□ -1.76
POLE-208	ENST00000535934	KRTAP5-8	O75690	187 aa		4.04	□□□□□ -1.76
POLE-208	ENST00000535934	OBSCN	Q5VST9	7968 aa		4.03	□□□□□ -1.76
POLE-208	ENST00000535934	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.92	□□□□□ -1.78
POLE-208	ENST00000535934	MT3	P25713	68 aa		3.86	□□□□□ -1.79
POLE-208	ENST00000535934	MUC5AC	P98088	5654 aa		3.86	□□□□□ -1.79
POLE-208	ENST00000535934	AHNAK	Q09666	5890 aa	Known RBP	3.85	□□□□□ -1.79
POLE-208	ENST00000535934	LCE3E	Q5T5B0	92 aa		3.8	□□□□□ -1.8
POLE-208	ENST00000535934	KRTAP5-1	Q6L8H4	278 aa		3.8	□□□□□ -1.8
POLE-208	ENST00000535934	KRTAP9-9	Q9BYP9	154 aa		3.79	□□□□□ -1.8
POLE-208	ENST00000535934	LCE3D	Q9BYE3	92 aa		3.78	□□□□□ -1.8
POLE-208	ENST00000535934	PRM1	P04553	51 aa		3.72	□□□□□ -1.81
POLE-208	ENST00000535934	LCE1E	Q5T753	118 aa		3.56	□□□□□ -1.84
POLE-208	ENST00000535934	KRTAP4-12	Q9BQ66	201 aa		3.51	□□□□□ -1.85
POLE-208	ENST00000535934	KRTAP4-2	Q9BYR5	136 aa		3.43	□□□□□ -1.86
POLE-208	ENST00000535934	LCE1B	Q5T7P3	118 aa		3.38	□□□□□ -1.87
POLE-208	ENST00000535934	LCE1C	Q5T751	118 aa		3.33	□□□□□ -1.88
POLE-208	ENST00000535934	LCE1F	Q5T754	118 aa		3.18	□□□□□ -1.9
POLE-208	ENST00000535934	KRTAP5-11	Q6L8G4	156 aa		3.01	□□□□□ -1.93
POLE-208	ENST00000535934	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.01	□□□□□ -1.93
POLE-208	ENST00000535934	KRTAP21-2	Q3LI59	83 aa		2.81	□□□□□ -1.96
POLE-208	ENST00000535934	PHGR1	C9JFL3	82 aa		2.66	□□□□□ -1.98
POLE-208	ENST00000535934	KRTAP4-4	Q9BYR3	166 aa		2.61	□□□□□ -1.99
POLE-208	ENST00000535934	KRTAP21-1	Q3LI58	79 aa		2.48	□□□□□ -2.01
POLE-208	ENST00000535934	MUC19	Q7Z5P9	8384 aa		2.48	□□□□□ -2.01
POLE-208	ENST00000535934	MUC16	Q8WXI7	14507 aa		1.68	□□□□□ -2.14

Retrieved 78 of 20,778 RNA–protein pairs in 51.9 ms