RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 C10orf95Q9H7T3 257 aa2.65□□□□□ -1.99
CDCA3-205ENST00000535871 KRTAP10-12P60413 245 aa2.64□□□□□ -1.99
CDCA3-205ENST00000535871 CRCT1Q9UGL9 99 aa2.64□□□□□ -1.99
CDCA3-205ENST00000535871 SSPOA2VEC9 5147 aa2.62□□□□□ -1.99
CDCA3-205ENST00000535871 FSIP2Q5CZC0 6907 aa2.62□□□□□ -1.99
CDCA3-205ENST00000535871 PP632Q6XCG6 107 aa2.61□□□□□ -1.99
CDCA3-205ENST00000535871 LCE3CQ5T5A8 94 aa2.6□□□□□ -1.99
CDCA3-205ENST00000535871 KTN1-AS1Q86SY8 53 aa2.58□□□□□ -2
CDCA3-205ENST00000535871 FCGBPQ9Y6R7 5405 aaPredicted RBP2.57□□□□□ -2
CDCA3-205ENST00000535871 KRTAP10-7P60409 375 aaPredicted RBP2.54□□□□□ -2
CDCA3-205ENST00000535871 KRTAP8-1Q8IUC2 63 aa2.51□□□□□ -2.01
CDCA3-205ENST00000535871 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
CDCA3-205ENST00000535871 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
CDCA3-205ENST00000535871 KRTAP5-9P26371 169 aa2.44□□□□□ -2.02
CDCA3-205ENST00000535871 KRTAP12-3P60328 96 aa2.42□□□□□ -2.02
CDCA3-205ENST00000535871 KRTAP6-3Q3LI67 103 aa2.41□□□□□ -2.02
CDCA3-205ENST00000535871 KRTAP19-7Q3SYF9 63 aa2.41□□□□□ -2.02
CDCA3-205ENST00000535871 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
CDCA3-205ENST00000535871 KMT2DO14686 5537 aa2.4□□□□□ -2.03
CDCA3-205ENST00000535871 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
CDCA3-205ENST00000535871 MT1EP04732 61 aa2.38□□□□□ -2.03
CDCA3-205ENST00000535871 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
CDCA3-205ENST00000535871 SPRR2FQ96RM1 72 aa2.34□□□□□ -2.03
CDCA3-205ENST00000535871 MT1GP13640 62 aa2.33□□□□□ -2.04
CDCA3-205ENST00000535871 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
CDCA3-205ENST00000535871 MT1LQ93083 61 aa2.32□□□□□ -2.04
CDCA3-205ENST00000535871 SYNE2Q8WXH0 6885 aaKnown RBP2.32□□□□□ -2.04
CDCA3-205ENST00000535871 SPRR5A0A1B0GTR4 108 aa2.27□□□□□ -2.05
CDCA3-205ENST00000535871 MUC12Q9UKN1 5478 aa2.26□□□□□ -2.05
CDCA3-205ENST00000535871 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
CDCA3-205ENST00000535871 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
CDCA3-205ENST00000535871 SPRR2EP22531 72 aa2.24□□□□□ -2.05
CDCA3-205ENST00000535871 SPRR2BP35325 72 aa2.24□□□□□ -2.05
CDCA3-205ENST00000535871 SPRR2AP35326 72 aa2.24□□□□□ -2.05
CDCA3-205ENST00000535871 MT1MQ8N339 61 aa2.23□□□□□ -2.05
CDCA3-205ENST00000535871 NEBP20929 6669 aa2.18□□□□□ -2.06
CDCA3-205ENST00000535871 SPRR2DP22532 72 aa2.17□□□□□ -2.06
CDCA3-205ENST00000535871 KRTAP2-3P0C7H8 128 aa2.12□□□□□ -2.07
CDCA3-205ENST00000535871 KRTAP2-4Q9BYR9 128 aa2.12□□□□□ -2.07
CDCA3-205ENST00000535871 DSTQ03001 7570 aaKnown RBP2.11□□□□□ -2.07
CDCA3-205ENST00000535871 KRTAP9-6A8MVA2 160 aa2.11□□□□□ -2.07
CDCA3-205ENST00000535871 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
CDCA3-205ENST00000535871 KRTAP4-3Q9BYR4 195 aa2.08□□□□□ -2.08
CDCA3-205ENST00000535871 KRTAP2-1Q9BYU5 128 aa2.07□□□□□ -2.08
CDCA3-205ENST00000535871 KRTAP20-1Q3LI63 56 aa2.06□□□□□ -2.08
CDCA3-205ENST00000535871 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
CDCA3-205ENST00000535871 KRTAP5-4Q6L8H1 288 aa2.02□□□□□ -2.09
CDCA3-205ENST00000535871 MT1AP04731 61 aa2□□□□□ -2.09
CDCA3-205ENST00000535871 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
CDCA3-205ENST00000535871 KRTAP12-4P60329 112 aa1.95□□□□□ -2.1
CDCA3-205ENST00000535871 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
CDCA3-205ENST00000535871 INE1O15225 51 aa1.87□□□□□ -2.11
CDCA3-205ENST00000535871 SYNE1Q8NF91 8797 aaKnown RBP1.85□□□□□ -2.11
CDCA3-205ENST00000535871 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
CDCA3-205ENST00000535871 MT4P47944 62 aa1.83□□□□□ -2.12
CDCA3-205ENST00000535871 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
CDCA3-205ENST00000535871 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
CDCA3-205ENST00000535871 KRTAP6-2Q3LI66 62 aa1.78□□□□□ -2.12
CDCA3-205ENST00000535871 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.7□□□□□ -2.14
CDCA3-205ENST00000535871 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
CDCA3-205ENST00000535871 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
CDCA3-205ENST00000535871 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
CDCA3-205ENST00000535871 OBSCNQ5VST9 7968 aa1.62□□□□□ -2.15
CDCA3-205ENST00000535871 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
CDCA3-205ENST00000535871 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
CDCA3-205ENST00000535871 GPR98Q8WXG9 6306 aa1.55□□□□□ -2.16
CDCA3-205ENST00000535871 LCE1CQ5T751 118 aa1.54□□□□□ -2.16
CDCA3-205ENST00000535871 LCE1BQ5T7P3 118 aa1.54□□□□□ -2.16
CDCA3-205ENST00000535871 MUC5ACP98088 5654 aa1.48□□□□□ -2.17
CDCA3-205ENST00000535871 KRTAP4-4Q9BYR3 166 aa1.42□□□□□ -2.18
CDCA3-205ENST00000535871 PRM1P04553 51 aa1.34□□□□□ -2.19
CDCA3-205ENST00000535871 MUC5BQ9HC84 5762 aaPredicted RBP1.33□□□□□ -2.2
CDCA3-205ENST00000535871 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
CDCA3-205ENST00000535871 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.2
CDCA3-205ENST00000535871 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
CDCA3-205ENST00000535871 MUC19Q7Z5P9 8384 aa1.14□□□□□ -2.23
CDCA3-205ENST00000535871 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
CDCA3-205ENST00000535871 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 61.3 ms