RNA–Protein interactions for RNA: ENST00000535809.1

LDHC-203, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-203ENST00000535809 KRTAP12-1P59990 96 aa2.82□□□□□ -1.96
LDHC-203ENST00000535809 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
LDHC-203ENST00000535809 A0A0D9SG42 100 aa2.74□□□□□ -1.97
LDHC-203ENST00000535809 KRTAP13-4Q3LI77 160 aa2.74□□□□□ -1.97
LDHC-203ENST00000535809 KMT2DO14686 5537 aa2.73□□□□□ -1.97
LDHC-203ENST00000535809 KRTAP19-6Q3LI70 58 aa2.71□□□□□ -1.98
LDHC-203ENST00000535809 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
LDHC-203ENST00000535809 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
LDHC-203ENST00000535809 MT2AP02795 61 aa2.66□□□□□ -1.98
LDHC-203ENST00000535809 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
LDHC-203ENST00000535809 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
LDHC-203ENST00000535809 KRTAP2-2Q9BYT5 123 aa2.66□□□□□ -1.98
LDHC-203ENST00000535809 RPS29P62273 56 aaKnown RBP2.65□□□□□ -1.99
LDHC-203ENST00000535809 MT1FP04733 61 aa2.64□□□□□ -1.99
LDHC-203ENST00000535809 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
LDHC-203ENST00000535809 KRTAP5-9P26371 169 aa2.58□□□□□ -2
LDHC-203ENST00000535809 KRTAP10-10P60014 251 aa2.58□□□□□ -2
LDHC-203ENST00000535809 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
LDHC-203ENST00000535809 C9orf92A6NGG3 77 aa2.57□□□□□ -2
LDHC-203ENST00000535809 MT3P25713 68 aa2.55□□□□□ -2
LDHC-203ENST00000535809 KRTAP2-1Q9BYU5 128 aa2.54□□□□□ -2
LDHC-203ENST00000535809 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
LDHC-203ENST00000535809 DSTQ03001 7570 aaKnown RBP2.52□□□□□ -2.01
LDHC-203ENST00000535809 TNP1P09430 55 aa2.51□□□□□ -2.01
LDHC-203ENST00000535809 SPRR2EP22531 72 aa2.47□□□□□ -2.01
LDHC-203ENST00000535809 SPRR2BP35325 72 aa2.47□□□□□ -2.01
LDHC-203ENST00000535809 SPRR2AP35326 72 aa2.47□□□□□ -2.01
LDHC-203ENST00000535809 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
LDHC-203ENST00000535809 SPRR2FQ96RM1 72 aa2.39□□□□□ -2.03
LDHC-203ENST00000535809 SPRR2DP22532 72 aa2.38□□□□□ -2.03
LDHC-203ENST00000535809 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
LDHC-203ENST00000535809 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
LDHC-203ENST00000535809 KRTAP10-5P60370 271 aa2.32□□□□□ -2.04
LDHC-203ENST00000535809 KRTAP9-6A8MVA2 160 aa2.31□□□□□ -2.04
LDHC-203ENST00000535809 MT1BP07438 61 aa2.3□□□□□ -2.04
LDHC-203ENST00000535809 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
LDHC-203ENST00000535809 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
LDHC-203ENST00000535809 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
LDHC-203ENST00000535809 KRTAP10-12P60413 245 aa2.23□□□□□ -2.05
LDHC-203ENST00000535809 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
LDHC-203ENST00000535809 KRTAP8-1Q8IUC2 63 aa2.23□□□□□ -2.05
LDHC-203ENST00000535809 KRTAP19-8Q3LI54 63 aa2.21□□□□□ -2.06
LDHC-203ENST00000535809 KRTAP4-3Q9BYR4 195 aa2.21□□□□□ -2.06
LDHC-203ENST00000535809 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
LDHC-203ENST00000535809 LCE3CQ5T5A8 94 aa2.18□□□□□ -2.06
LDHC-203ENST00000535809 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.06
LDHC-203ENST00000535809 SPRR2GQ9BYE4 73 aa2.14□□□□□ -2.07
LDHC-203ENST00000535809 MT4P47944 62 aa2.13□□□□□ -2.07
LDHC-203ENST00000535809 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
LDHC-203ENST00000535809 KRTAP12-3P60328 96 aa2.07□□□□□ -2.08
LDHC-203ENST00000535809 MT1XP80297 61 aa2.05□□□□□ -2.08
LDHC-203ENST00000535809 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
LDHC-203ENST00000535809 LCE3AQ5TA76 89 aa2□□□□□ -2.09
LDHC-203ENST00000535809 LCE3EQ5T5B0 92 aa1.99□□□□□ -2.09
LDHC-203ENST00000535809 KRTAP19-3Q7Z4W3 81 aa1.9□□□□□ -2.11
LDHC-203ENST00000535809 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
LDHC-203ENST00000535809 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
LDHC-203ENST00000535809 MT1EP04732 61 aa1.84□□□□□ -2.11
LDHC-203ENST00000535809 KRTAP19-7Q3SYF9 63 aa1.84□□□□□ -2.11
LDHC-203ENST00000535809 MT1AP04731 61 aa1.83□□□□□ -2.12
LDHC-203ENST00000535809 KRTAP19-5Q3LI72 72 aa1.83□□□□□ -2.12
LDHC-203ENST00000535809 KRTAP5-5Q701N2 237 aaPredicted RBP1.81□□□□□ -2.12
LDHC-203ENST00000535809 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
LDHC-203ENST00000535809 MT1MQ8N339 61 aa1.79□□□□□ -2.12
LDHC-203ENST00000535809 MT1GP13640 62 aa1.78□□□□□ -2.12
LDHC-203ENST00000535809 PRM1P04553 51 aa1.77□□□□□ -2.13
LDHC-203ENST00000535809 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
LDHC-203ENST00000535809 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
LDHC-203ENST00000535809 LCE3DQ9BYE3 92 aa1.69□□□□□ -2.14
LDHC-203ENST00000535809 MT1LQ93083 61 aa1.68□□□□□ -2.14
LDHC-203ENST00000535809 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
LDHC-203ENST00000535809 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
LDHC-203ENST00000535809 KRTAP6-1Q3LI64 71 aa1.45□□□□□ -2.18
LDHC-203ENST00000535809 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
LDHC-203ENST00000535809 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
LDHC-203ENST00000535809 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
LDHC-203ENST00000535809 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 180.4 ms