RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 M0QY20 66 aa-0.57□□□□□ -2.5
PRKDC-205ENST00000535375 M0QZ58 72 aa-0.57□□□□□ -2.5
PRKDC-205ENST00000535375 SFTA3P0C7M3 94 aa-0.57□□□□□ -2.5
PRKDC-205ENST00000535375 FCER1GP30273 86 aa-0.57□□□□□ -2.5
PRKDC-205ENST00000535375 DEFB114Q30KQ6 69 aa-0.57□□□□□ -2.5
PRKDC-205ENST00000535375 ANKARQ7Z5J8 1434 aa-0.57□□□□□ -2.5
PRKDC-205ENST00000535375 LINC01546A6NGU7 62 aa-0.58□□□□□ -2.5
PRKDC-205ENST00000535375 ADIRFQ15847 76 aa-0.58□□□□□ -2.5
PRKDC-205ENST00000535375 A8MTW9 85 aa-0.59□□□□□ -2.5
PRKDC-205ENST00000535375 C18orf32Q8TCD1 76 aa-0.59□□□□□ -2.5
PRKDC-205ENST00000535375 PRXQ9BXM0 1461 aa-0.6□□□□□ -2.5
PRKDC-205ENST00000535375 S100A13Q99584 98 aa-0.6□□□□□ -2.51
PRKDC-205ENST00000535375 H3BVH4 76 aa-0.61□□□□□ -2.51
PRKDC-205ENST00000535375 DEFB4AO15263 64 aa-0.61□□□□□ -2.51
PRKDC-205ENST00000535375 IQGAP3Q86VI3 1631 aa-0.61□□□□□ -2.51
PRKDC-205ENST00000535375 SPART-AS1P0CW21 52 aa-0.62□□□□□ -2.51
PRKDC-205ENST00000535375 GNG2P59768 71 aa-0.62□□□□□ -2.51
PRKDC-205ENST00000535375 ATXN8Q156A1 80 aa-0.62□□□□□ -2.51
PRKDC-205ENST00000535375 KAAG1Q9UBP8 84 aa-0.63□□□□□ -2.51
PRKDC-205ENST00000535375 K7EMI3 77 aa-0.64□□□□□ -2.51
PRKDC-205ENST00000535375 LEAP2Q969E1 77 aa-0.64□□□□□ -2.51
PRKDC-205ENST00000535375 ABRACLQ9P1F3 81 aa-0.64□□□□□ -2.51
PRKDC-205ENST00000535375 HILPDAQ9Y5L2 63 aa-0.64□□□□□ -2.51
PRKDC-205ENST00000535375 DEFB136Q30KP8 78 aa-0.65□□□□□ -2.51
PRKDC-205ENST00000535375 LINC00308Q8TCZ7 52 aa-0.65□□□□□ -2.51
PRKDC-205ENST00000535375 TMEM167BQ9NRX6 74 aa-0.65□□□□□ -2.51
PRKDC-205ENST00000535375 SMIM27A0A1W2PRY6 76 aa-0.66□□□□□ -2.52
PRKDC-205ENST00000535375 LINC01549A6NIU2 74 aa-0.66□□□□□ -2.52
PRKDC-205ENST00000535375 M0R1W7 72 aa-0.66□□□□□ -2.52
PRKDC-205ENST00000535375 IGIPA6NJ69 53 aa-0.67□□□□□ -2.52
PRKDC-205ENST00000535375 RPS29P62273 56 aaKnown RBP-0.67□□□□□ -2.52
PRKDC-205ENST00000535375 WFDC10BQ8IUB3 73 aa-0.67□□□□□ -2.52
PRKDC-205ENST00000535375 GNG13Q9P2W3 67 aa-0.67□□□□□ -2.52
PRKDC-205ENST00000535375 POLR2KP53803 58 aaKnown RBP-0.68□□□□□ -2.52
PRKDC-205ENST00000535375 DEFB131AP59861 70 aa-0.69□□□□□ -2.52
PRKDC-205ENST00000535375 SERF2P84101 59 aa-0.69□□□□□ -2.52
PRKDC-205ENST00000535375 TFF3Q07654 80 aa-0.69□□□□□ -2.52
PRKDC-205ENST00000535375 NMES1Q9C002 83 aa-0.69□□□□□ -2.52
PRKDC-205ENST00000535375 H0YGX0 51 aa-0.71□□□□□ -2.52
PRKDC-205ENST00000535375 PDCD5O14737 125 aa-0.71□□□□□ -2.52
PRKDC-205ENST00000535375 SMCO4Q9NRQ5 59 aa-0.71□□□□□ -2.52
PRKDC-205ENST00000535375 STATHP02808 62 aa-0.74□□□□□ -2.53
PRKDC-205ENST00000535375 S100ZQ8WXG8 99 aa-0.74□□□□□ -2.53
PRKDC-205ENST00000535375 A0A087WWC5 75 aa-0.76□□□□□ -2.53
PRKDC-205ENST00000535375 PLNP26678 52 aa-0.77□□□□□ -2.53
PRKDC-205ENST00000535375 SMIM2Q9BVW6 85 aa-0.77□□□□□ -2.53
PRKDC-205ENST00000535375 NDUFA1O15239 70 aa-0.81□□□□□ -2.54
PRKDC-205ENST00000535375 CMC2Q9NRP2 79 aa-0.82□□□□□ -2.54
PRKDC-205ENST00000535375 LINC01590Q5TEZ4 76 aa-0.84□□□□□ -2.54
PRKDC-205ENST00000535375 RHPN1-AS1Q9BWJ2 59 aa-0.84□□□□□ -2.54
PRKDC-205ENST00000535375 TTTY10Q9BZA0 68 aa-0.84□□□□□ -2.54
PRKDC-205ENST00000535375 DEFB133Q30KQ1 61 aa-0.85□□□□□ -2.55
PRKDC-205ENST00000535375 TOMM7Q9P0U1 55 aa-0.85□□□□□ -2.55
PRKDC-205ENST00000535375 A0A096LNI7 61 aa-0.88□□□□□ -2.55
PRKDC-205ENST00000535375 DEFB108AA8MXU0 73 aa-0.89□□□□□ -2.55
PRKDC-205ENST00000535375 HTN1P15515 57 aa-0.89□□□□□ -2.55
PRKDC-205ENST00000535375 GCC2Q8IWJ2 1684 aa-0.9□□□□□ -2.55
PRKDC-205ENST00000535375 SMIM31A0A1B0GVY4 71 aa-0.9□□□□□ -2.55
PRKDC-205ENST00000535375 CD52P31358 61 aa-0.91□□□□□ -2.56
PRKDC-205ENST00000535375 RPL39P62891 51 aaKnown RBP-0.91□□□□□ -2.56
PRKDC-205ENST00000535375 SNRPGP15A8MWD9 76 aa-0.94□□□□□ -2.56
PRKDC-205ENST00000535375 RPL39LQ96EH5 51 aaKnown RBP-0.94□□□□□ -2.56
PRKDC-205ENST00000535375 LINC01556Q5JQF7 62 aa-0.99□□□□□ -2.57
PRKDC-205ENST00000535375 H3BSH0 61 aa-1□□□□□ -2.57
PRKDC-205ENST00000535375 H3BUX3 64 aa-1□□□□□ -2.57
PRKDC-205ENST00000535375 TOMM5Q8N4H5 51 aa-1.01□□□□□ -2.57
PRKDC-205ENST00000535375 DEFB108BQ8NET1 73 aa-1.02□□□□□ -2.57
PRKDC-205ENST00000535375 K7EIM0 57 aa-1.05□□□□□ -2.58
PRKDC-205ENST00000535375 A0A096LPF7 62 aa-1.1□□□□□ -2.59
PRKDC-205ENST00000535375 APELAP0DMC3 54 aa-1.1□□□□□ -2.59
PRKDC-205ENST00000535375 ARHGAP5-AS1Q96IT6 56 aa-1.1□□□□□ -2.59
PRKDC-205ENST00000535375 PRCDQ00LT1 54 aa-1.12□□□□□ -2.59
PRKDC-205ENST00000535375 TMEM167AQ8TBQ9 72 aa-1.14□□□□□ -2.59
PRKDC-205ENST00000535375 HTN3P15516 51 aa-1.15□□□□□ -2.59
PRKDC-205ENST00000535375 SNRPGP62308 76 aaKnown RBP-1.17□□□□□ -2.6
PRKDC-205ENST00000535375 Q9Y3F1 56 aa-1.19□□□□□ -2.6
PRKDC-205ENST00000535375 RPL39P5Q59GN2 51 aa-1.2□□□□□ -2.6
PRKDC-205ENST00000535375 COX14Q96I36 57 aa-1.31□□□□□ -2.62
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms