RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 SPRR2AP35326 72 aa3.51□□□□□ -1.85
SFSWAP-202ENST00000535202 KRTAP8-1Q8IUC2 63 aa3.51□□□□□ -1.85
SFSWAP-202ENST00000535202 KRTAP2-3P0C7H8 128 aa3.47□□□□□ -1.85
SFSWAP-202ENST00000535202 KRTAP2-4Q9BYR9 128 aa3.47□□□□□ -1.85
SFSWAP-202ENST00000535202 KRTAP4-8A0A0G2JLE6 195 aa3.45□□□□□ -1.86
SFSWAP-202ENST00000535202 KRTAP4-8Q9BYQ9 185 aa3.45□□□□□ -1.86
SFSWAP-202ENST00000535202 KRTAP10-7P60409 375 aaPredicted RBP3.43□□□□□ -1.86
SFSWAP-202ENST00000535202 LCE1AQ5T7P2 110 aa3.43□□□□□ -1.86
SFSWAP-202ENST00000535202 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
SFSWAP-202ENST00000535202 SPRR2DP22532 72 aa3.39□□□□□ -1.87
SFSWAP-202ENST00000535202 TNP1P09430 55 aa3.37□□□□□ -1.87
SFSWAP-202ENST00000535202 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
SFSWAP-202ENST00000535202 KRTAP2-1Q9BYU5 128 aa3.36□□□□□ -1.87
SFSWAP-202ENST00000535202 LCE3BQ5TA77 95 aa3.3□□□□□ -1.88
SFSWAP-202ENST00000535202 KRTAP19-7Q3SYF9 63 aa3.2□□□□□ -1.9
SFSWAP-202ENST00000535202 MT1EP04732 61 aa3.18□□□□□ -1.9
SFSWAP-202ENST00000535202 LCE5AQ5TCM9 118 aa3.17□□□□□ -1.9
SFSWAP-202ENST00000535202 KRTAP19-3Q7Z4W3 81 aa3.17□□□□□ -1.9
SFSWAP-202ENST00000535202 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
SFSWAP-202ENST00000535202 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.91
SFSWAP-202ENST00000535202 MT1GP13640 62 aa3.08□□□□□ -1.92
SFSWAP-202ENST00000535202 KRTAP4-9Q9BYQ8 210 aa3.08□□□□□ -1.92
SFSWAP-202ENST00000535202 MT1MQ8N339 61 aa3.04□□□□□ -1.92
SFSWAP-202ENST00000535202 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
SFSWAP-202ENST00000535202 MT1LQ93083 61 aa3.03□□□□□ -1.92
SFSWAP-202ENST00000535202 LCE1DQ5T752 114 aa3□□□□□ -1.93
SFSWAP-202ENST00000535202 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
SFSWAP-202ENST00000535202 MT4P47944 62 aa2.98□□□□□ -1.93
SFSWAP-202ENST00000535202 LCE4AQ5TA78 99 aa2.98□□□□□ -1.93
SFSWAP-202ENST00000535202 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
SFSWAP-202ENST00000535202 KRTAP12-3P60328 96 aa2.92□□□□□ -1.94
SFSWAP-202ENST00000535202 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
SFSWAP-202ENST00000535202 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
SFSWAP-202ENST00000535202 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.95
SFSWAP-202ENST00000535202 KRTAP4-6Q9BYQ5 205 aa2.87□□□□□ -1.95
SFSWAP-202ENST00000535202 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
SFSWAP-202ENST00000535202 KRTAP19-4Q3LI73 84 aa2.85□□□□□ -1.95
SFSWAP-202ENST00000535202 LCE3CQ5T5A8 94 aa2.79□□□□□ -1.96
SFSWAP-202ENST00000535202 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
SFSWAP-202ENST00000535202 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
SFSWAP-202ENST00000535202 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
SFSWAP-202ENST00000535202 LOC100996750A0A140TA64 210 aa2.75□□□□□ -1.97
SFSWAP-202ENST00000535202 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
SFSWAP-202ENST00000535202 KRTAP12-4P60329 112 aa2.72□□□□□ -1.97
SFSWAP-202ENST00000535202 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
SFSWAP-202ENST00000535202 SYNE1Q8NF91 8797 aaKnown RBP2.68□□□□□ -1.98
SFSWAP-202ENST00000535202 KRTAP9-6A8MVA2 160 aa2.6□□□□□ -1.99
SFSWAP-202ENST00000535202 MT1AP04731 61 aa2.58□□□□□ -2
SFSWAP-202ENST00000535202 KRTAP6-1Q3LI64 71 aa2.58□□□□□ -2
SFSWAP-202ENST00000535202 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
SFSWAP-202ENST00000535202 KRTAP4-11Q9BYQ6 195 aa2.52□□□□□ -2.01
SFSWAP-202ENST00000535202 KRTAP9-4Q9BYQ2 154 aa2.49□□□□□ -2.01
SFSWAP-202ENST00000535202 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
SFSWAP-202ENST00000535202 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
SFSWAP-202ENST00000535202 MT3P25713 68 aa2.36□□□□□ -2.03
SFSWAP-202ENST00000535202 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
SFSWAP-202ENST00000535202 KRTAP9-9Q9BYP9 154 aa2.33□□□□□ -2.04
SFSWAP-202ENST00000535202 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
SFSWAP-202ENST00000535202 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
SFSWAP-202ENST00000535202 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
SFSWAP-202ENST00000535202 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
SFSWAP-202ENST00000535202 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
SFSWAP-202ENST00000535202 PRM1P04553 51 aa2.21□□□□□ -2.06
SFSWAP-202ENST00000535202 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
SFSWAP-202ENST00000535202 LCE1EQ5T753 118 aa2.15□□□□□ -2.07
SFSWAP-202ENST00000535202 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
SFSWAP-202ENST00000535202 KRTAP4-2Q9BYR5 136 aa2.06□□□□□ -2.08
SFSWAP-202ENST00000535202 KRTAP4-12Q9BQ66 201 aa2.03□□□□□ -2.08
SFSWAP-202ENST00000535202 LCE1CQ5T751 118 aa2□□□□□ -2.09
SFSWAP-202ENST00000535202 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
SFSWAP-202ENST00000535202 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
SFSWAP-202ENST00000535202 LCE1FQ5T754 118 aa1.78□□□□□ -2.12
SFSWAP-202ENST00000535202 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
SFSWAP-202ENST00000535202 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
SFSWAP-202ENST00000535202 KRTAP4-4Q9BYR3 166 aa1.58□□□□□ -2.16
SFSWAP-202ENST00000535202 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
SFSWAP-202ENST00000535202 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
SFSWAP-202ENST00000535202 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 66.4 ms