RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 KRTAP9-7A8MTY7 169 aa4.67□□□□□ -1.66
SCARB1-204ENST00000535005 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
SCARB1-204ENST00000535005 KRTAP19-7Q3SYF9 63 aa4.58□□□□□ -1.68
SCARB1-204ENST00000535005 SPRR2FQ96RM1 72 aa4.58□□□□□ -1.68
SCARB1-204ENST00000535005 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
SCARB1-204ENST00000535005 KRTAP12-3P60328 96 aa4.53□□□□□ -1.68
SCARB1-204ENST00000535005 MT1EP04732 61 aa4.51□□□□□ -1.69
SCARB1-204ENST00000535005 MUC12Q9UKN1 5478 aa4.5□□□□□ -1.69
SCARB1-204ENST00000535005 LCE3BQ5TA77 95 aa4.48□□□□□ -1.69
SCARB1-204ENST00000535005 MDN1Q9NU22 5596 aa4.47□□□□□ -1.69
SCARB1-204ENST00000535005 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.69
SCARB1-204ENST00000535005 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
SCARB1-204ENST00000535005 NEBP20929 6669 aa4.44□□□□□ -1.7
SCARB1-204ENST00000535005 SPRR2EP22531 72 aa4.42□□□□□ -1.7
SCARB1-204ENST00000535005 SPRR2BP35325 72 aa4.42□□□□□ -1.7
SCARB1-204ENST00000535005 SPRR2AP35326 72 aa4.42□□□□□ -1.7
SCARB1-204ENST00000535005 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
SCARB1-204ENST00000535005 MT1LQ93083 61 aa4.38□□□□□ -1.71
SCARB1-204ENST00000535005 LCE5AQ5TCM9 118 aa4.35□□□□□ -1.71
SCARB1-204ENST00000535005 MT1GP13640 62 aa4.35□□□□□ -1.71
SCARB1-204ENST00000535005 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
SCARB1-204ENST00000535005 KRTAP9-4Q9BYQ2 154 aa4.32□□□□□ -1.72
SCARB1-204ENST00000535005 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
SCARB1-204ENST00000535005 LCE3CQ5T5A8 94 aa4.29□□□□□ -1.72
SCARB1-204ENST00000535005 SPRR2DP22532 72 aa4.26□□□□□ -1.73
SCARB1-204ENST00000535005 MT1MQ8N339 61 aa4.26□□□□□ -1.73
SCARB1-204ENST00000535005 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
SCARB1-204ENST00000535005 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
SCARB1-204ENST00000535005 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
SCARB1-204ENST00000535005 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
SCARB1-204ENST00000535005 KRTAP2-1Q9BYU5 128 aa4.14□□□□□ -1.75
SCARB1-204ENST00000535005 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
SCARB1-204ENST00000535005 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
SCARB1-204ENST00000535005 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
SCARB1-204ENST00000535005 DSTQ03001 7570 aaKnown RBP4.07□□□□□ -1.76
SCARB1-204ENST00000535005 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
SCARB1-204ENST00000535005 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
SCARB1-204ENST00000535005 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
SCARB1-204ENST00000535005 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
SCARB1-204ENST00000535005 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
SCARB1-204ENST00000535005 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
SCARB1-204ENST00000535005 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
SCARB1-204ENST00000535005 MT1AP04731 61 aa3.74□□□□□ -1.81
SCARB1-204ENST00000535005 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
SCARB1-204ENST00000535005 MT4P47944 62 aa3.68□□□□□ -1.82
SCARB1-204ENST00000535005 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
SCARB1-204ENST00000535005 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
SCARB1-204ENST00000535005 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
SCARB1-204ENST00000535005 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
SCARB1-204ENST00000535005 KRTAP5-3Q6L8H2 238 aa3.56□□□□□ -1.84
SCARB1-204ENST00000535005 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
SCARB1-204ENST00000535005 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
SCARB1-204ENST00000535005 MT3P25713 68 aa3.4□□□□□ -1.87
SCARB1-204ENST00000535005 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
SCARB1-204ENST00000535005 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
SCARB1-204ENST00000535005 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
SCARB1-204ENST00000535005 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
SCARB1-204ENST00000535005 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
SCARB1-204ENST00000535005 PRM1P04553 51 aa3.23□□□□□ -1.89
SCARB1-204ENST00000535005 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
SCARB1-204ENST00000535005 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
SCARB1-204ENST00000535005 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
SCARB1-204ENST00000535005 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
SCARB1-204ENST00000535005 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
SCARB1-204ENST00000535005 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
SCARB1-204ENST00000535005 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
SCARB1-204ENST00000535005 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
SCARB1-204ENST00000535005 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
SCARB1-204ENST00000535005 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
SCARB1-204ENST00000535005 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
SCARB1-204ENST00000535005 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
SCARB1-204ENST00000535005 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
SCARB1-204ENST00000535005 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
SCARB1-204ENST00000535005 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
SCARB1-204ENST00000535005 PHGR1C9JFL3 82 aa2.15□□□□□ -2.06
SCARB1-204ENST00000535005 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
SCARB1-204ENST00000535005 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
SCARB1-204ENST00000535005 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 10.6 ms