RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 MT1LQ93083 61 aa4.74□□□□□ -1.65
BEST1-208ENST00000534553 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
BEST1-208ENST00000534553 MACF1Q9UPN3 7388 aaKnown RBP4.67□□□□□ -1.66
BEST1-208ENST00000534553 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
BEST1-208ENST00000534553 MT1GP13640 62 aa4.6□□□□□ -1.67
BEST1-208ENST00000534553 KRTAP19-3Q7Z4W3 81 aa4.6□□□□□ -1.67
BEST1-208ENST00000534553 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
BEST1-208ENST00000534553 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
BEST1-208ENST00000534553 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
BEST1-208ENST00000534553 SPRR2FQ96RM1 72 aa4.58□□□□□ -1.68
BEST1-208ENST00000534553 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
BEST1-208ENST00000534553 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
BEST1-208ENST00000534553 SYNE2Q8WXH0 6885 aaKnown RBP4.53□□□□□ -1.68
BEST1-208ENST00000534553 MT1MQ8N339 61 aa4.51□□□□□ -1.69
BEST1-208ENST00000534553 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
BEST1-208ENST00000534553 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
BEST1-208ENST00000534553 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
BEST1-208ENST00000534553 KRTAP6-3Q3LI67 103 aa4.46□□□□□ -1.69
BEST1-208ENST00000534553 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
BEST1-208ENST00000534553 MDN1Q9NU22 5596 aa4.37□□□□□ -1.71
BEST1-208ENST00000534553 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
BEST1-208ENST00000534553 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
BEST1-208ENST00000534553 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
BEST1-208ENST00000534553 SPRR2EP22531 72 aa4.33□□□□□ -1.72
BEST1-208ENST00000534553 SPRR2BP35325 72 aa4.33□□□□□ -1.72
BEST1-208ENST00000534553 SPRR2AP35326 72 aa4.33□□□□□ -1.72
BEST1-208ENST00000534553 KRTAP2-3P0C7H8 128 aa4.3□□□□□ -1.72
BEST1-208ENST00000534553 KRTAP2-4Q9BYR9 128 aa4.3□□□□□ -1.72
BEST1-208ENST00000534553 KRTAP2-1Q9BYU5 128 aa4.3□□□□□ -1.72
BEST1-208ENST00000534553 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
BEST1-208ENST00000534553 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
BEST1-208ENST00000534553 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
BEST1-208ENST00000534553 INE1O15225 51 aa4.19□□□□□ -1.74
BEST1-208ENST00000534553 SPRR2DP22532 72 aa4.18□□□□□ -1.74
BEST1-208ENST00000534553 NEBP20929 6669 aa4.11□□□□□ -1.75
BEST1-208ENST00000534553 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
BEST1-208ENST00000534553 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
BEST1-208ENST00000534553 MT1AP04731 61 aa4.05□□□□□ -1.76
BEST1-208ENST00000534553 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
BEST1-208ENST00000534553 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.78
BEST1-208ENST00000534553 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
BEST1-208ENST00000534553 KRTAP20-1Q3LI63 56 aa3.89□□□□□ -1.79
BEST1-208ENST00000534553 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
BEST1-208ENST00000534553 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
BEST1-208ENST00000534553 KRTAP5-4Q6L8H1 288 aa3.79□□□□□ -1.8
BEST1-208ENST00000534553 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
BEST1-208ENST00000534553 MT3P25713 68 aa3.68□□□□□ -1.82
BEST1-208ENST00000534553 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
BEST1-208ENST00000534553 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
BEST1-208ENST00000534553 MT4P47944 62 aa3.61□□□□□ -1.83
BEST1-208ENST00000534553 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
BEST1-208ENST00000534553 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
BEST1-208ENST00000534553 HMCN1Q96RW7 5635 aa3.5□□□□□ -1.85
BEST1-208ENST00000534553 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
BEST1-208ENST00000534553 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
BEST1-208ENST00000534553 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
BEST1-208ENST00000534553 PRM1P04553 51 aa3.17□□□□□ -1.9
BEST1-208ENST00000534553 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
BEST1-208ENST00000534553 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.93
BEST1-208ENST00000534553 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
BEST1-208ENST00000534553 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
BEST1-208ENST00000534553 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
BEST1-208ENST00000534553 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
BEST1-208ENST00000534553 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
BEST1-208ENST00000534553 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
BEST1-208ENST00000534553 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
BEST1-208ENST00000534553 KRTAP5-7Q6L8G8 165 aa2.88□□□□□ -1.95
BEST1-208ENST00000534553 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
BEST1-208ENST00000534553 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
BEST1-208ENST00000534553 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
BEST1-208ENST00000534553 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
BEST1-208ENST00000534553 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
BEST1-208ENST00000534553 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
BEST1-208ENST00000534553 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
BEST1-208ENST00000534553 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
BEST1-208ENST00000534553 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
BEST1-208ENST00000534553 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 92.7 ms