RNA–Protein interactions for RNA: ENST00000534435.1

SHARPIN-210, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-210ENST00000534435 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
SHARPIN-210ENST00000534435 KRTAP8-1Q8IUC2 63 aa3.6□□□□□ -1.83
SHARPIN-210ENST00000534435 CAMK2N1Q7Z7J9 78 aa3.59□□□□□ -1.83
SHARPIN-210ENST00000534435 KRTAP23-1A1A580 65 aa3.58□□□□□ -1.84
SHARPIN-210ENST00000534435 KRTAP15-1Q3LI76 137 aa3.56□□□□□ -1.84
SHARPIN-210ENST00000534435 KRTAP4-8A0A0G2JLE6 195 aa3.53□□□□□ -1.84
SHARPIN-210ENST00000534435 KRTAP4-8Q9BYQ9 185 aa3.53□□□□□ -1.84
SHARPIN-210ENST00000534435 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
SHARPIN-210ENST00000534435 TNP1P09430 55 aa3.5□□□□□ -1.85
SHARPIN-210ENST00000534435 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
SHARPIN-210ENST00000534435 MT1XP80297 61 aa3.47□□□□□ -1.85
SHARPIN-210ENST00000534435 PLAC4Q8WY50 150 aa3.47□□□□□ -1.85
SHARPIN-210ENST00000534435 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
SHARPIN-210ENST00000534435 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
SHARPIN-210ENST00000534435 KRTAP5-10Q6L8G5 202 aa3.39□□□□□ -1.87
SHARPIN-210ENST00000534435 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
SHARPIN-210ENST00000534435 PRO2289Q9P1D8 64 aa3.37□□□□□ -1.87
SHARPIN-210ENST00000534435 MT4P47944 62 aa3.34□□□□□ -1.87
SHARPIN-210ENST00000534435 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.87
SHARPIN-210ENST00000534435 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
SHARPIN-210ENST00000534435 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
SHARPIN-210ENST00000534435 KRTAP10-12P60413 245 aa3.24□□□□□ -1.89
SHARPIN-210ENST00000534435 LCE5AQ5TCM9 118 aa3.22□□□□□ -1.89
SHARPIN-210ENST00000534435 KRTAP4-6Q9BYQ5 205 aa3.2□□□□□ -1.9
SHARPIN-210ENST00000534435 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
SHARPIN-210ENST00000534435 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
SHARPIN-210ENST00000534435 LCE4AQ5TA78 99 aa3.18□□□□□ -1.9
SHARPIN-210ENST00000534435 KRTAP19-3Q7Z4W3 81 aa3.14□□□□□ -1.91
SHARPIN-210ENST00000534435 KRTAP12-3P60328 96 aa3.12□□□□□ -1.91
SHARPIN-210ENST00000534435 KRTAP19-7Q3SYF9 63 aa3.12□□□□□ -1.91
SHARPIN-210ENST00000534435 MT1EP04732 61 aa3.1□□□□□ -1.91
SHARPIN-210ENST00000534435 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
SHARPIN-210ENST00000534435 KRTAP19-4Q3LI73 84 aa3.08□□□□□ -1.92
SHARPIN-210ENST00000534435 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
SHARPIN-210ENST00000534435 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
SHARPIN-210ENST00000534435 MT1MQ8N339 61 aa2.99□□□□□ -1.93
SHARPIN-210ENST00000534435 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
SHARPIN-210ENST00000534435 MT1GP13640 62 aa2.97□□□□□ -1.93
SHARPIN-210ENST00000534435 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
SHARPIN-210ENST00000534435 INE1O15225 51 aa2.94□□□□□ -1.94
SHARPIN-210ENST00000534435 KRTAP19-5Q3LI72 72 aa2.94□□□□□ -1.94
SHARPIN-210ENST00000534435 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
SHARPIN-210ENST00000534435 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
SHARPIN-210ENST00000534435 MT1LQ93083 61 aa2.88□□□□□ -1.95
SHARPIN-210ENST00000534435 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.95
SHARPIN-210ENST00000534435 KRTAP4-7Q9BYR0 210 aa2.83□□□□□ -1.96
SHARPIN-210ENST00000534435 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
SHARPIN-210ENST00000534435 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
SHARPIN-210ENST00000534435 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
SHARPIN-210ENST00000534435 KRTAP12-4P60329 112 aa2.75□□□□□ -1.97
SHARPIN-210ENST00000534435 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
SHARPIN-210ENST00000534435 LOC100996750A0A140TA64 210 aa2.69□□□□□ -1.98
SHARPIN-210ENST00000534435 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
SHARPIN-210ENST00000534435 KRTAP9-9Q9BYP9 154 aa2.64□□□□□ -1.99
SHARPIN-210ENST00000534435 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
SHARPIN-210ENST00000534435 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
SHARPIN-210ENST00000534435 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
SHARPIN-210ENST00000534435 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
SHARPIN-210ENST00000534435 MT1AP04731 61 aa2.42□□□□□ -2.02
SHARPIN-210ENST00000534435 KRTAP9-4Q9BYQ2 154 aa2.41□□□□□ -2.02
SHARPIN-210ENST00000534435 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
SHARPIN-210ENST00000534435 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
SHARPIN-210ENST00000534435 MT3P25713 68 aa2.23□□□□□ -2.05
SHARPIN-210ENST00000534435 KRTAP4-12Q9BQ66 201 aa2.17□□□□□ -2.06
SHARPIN-210ENST00000534435 KRTAP4-2Q9BYR5 136 aa2.17□□□□□ -2.06
SHARPIN-210ENST00000534435 LCE1FQ5T754 118 aa2.14□□□□□ -2.07
SHARPIN-210ENST00000534435 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
SHARPIN-210ENST00000534435 LCE1EQ5T753 118 aa2.1□□□□□ -2.07
SHARPIN-210ENST00000534435 PRM1P04553 51 aa2.03□□□□□ -2.08
SHARPIN-210ENST00000534435 PHGR1C9JFL3 82 aa2□□□□□ -2.09
SHARPIN-210ENST00000534435 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
SHARPIN-210ENST00000534435 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
SHARPIN-210ENST00000534435 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
SHARPIN-210ENST00000534435 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
SHARPIN-210ENST00000534435 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
SHARPIN-210ENST00000534435 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
SHARPIN-210ENST00000534435 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
SHARPIN-210ENST00000534435 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 49.2 ms