RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 FLGP20930 4061 aaPredicted RBP4.04□□□□□ -1.76
AMBRA1-212ENST00000534300 KRTAP4-8A0A0G2JLE6 195 aa4.04□□□□□ -1.76
AMBRA1-212ENST00000534300 KRTAP4-8Q9BYQ9 185 aa4.04□□□□□ -1.76
AMBRA1-212ENST00000534300 KRTAP19-3Q7Z4W3 81 aa4.01□□□□□ -1.77
AMBRA1-212ENST00000534300 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.78
AMBRA1-212ENST00000534300 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
AMBRA1-212ENST00000534300 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
AMBRA1-212ENST00000534300 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.91□□□□□ -1.78
AMBRA1-212ENST00000534300 MT1LQ93083 61 aa3.9□□□□□ -1.79
AMBRA1-212ENST00000534300 FSIP2Q5CZC0 6907 aa3.89□□□□□ -1.79
AMBRA1-212ENST00000534300 MT1EP04732 61 aa3.88□□□□□ -1.79
AMBRA1-212ENST00000534300 KRTAP2-3P0C7H8 128 aa3.81□□□□□ -1.8
AMBRA1-212ENST00000534300 KRTAP2-4Q9BYR9 128 aa3.81□□□□□ -1.8
AMBRA1-212ENST00000534300 KRTAP4-7Q9BYR0 210 aa3.8□□□□□ -1.8
AMBRA1-212ENST00000534300 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
AMBRA1-212ENST00000534300 PRM1P04553 51 aa3.78□□□□□ -1.8
AMBRA1-212ENST00000534300 MT1MQ8N339 61 aa3.77□□□□□ -1.81
AMBRA1-212ENST00000534300 SYNE2Q8WXH0 6885 aaKnown RBP3.74□□□□□ -1.81
AMBRA1-212ENST00000534300 MT4P47944 62 aa3.73□□□□□ -1.81
AMBRA1-212ENST00000534300 MT3P25713 68 aa3.68□□□□□ -1.82
AMBRA1-212ENST00000534300 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
AMBRA1-212ENST00000534300 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
AMBRA1-212ENST00000534300 USH2AO75445 5202 aa3.62□□□□□ -1.83
AMBRA1-212ENST00000534300 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
AMBRA1-212ENST00000534300 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
AMBRA1-212ENST00000534300 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
AMBRA1-212ENST00000534300 SSPOA2VEC9 5147 aa3.51□□□□□ -1.85
AMBRA1-212ENST00000534300 MT1AP04731 61 aa3.48□□□□□ -1.85
AMBRA1-212ENST00000534300 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
AMBRA1-212ENST00000534300 FCGBPQ9Y6R7 5405 aaPredicted RBP3.46□□□□□ -1.85
AMBRA1-212ENST00000534300 LCE5AQ5TCM9 118 aa3.46□□□□□ -1.86
AMBRA1-212ENST00000534300 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
AMBRA1-212ENST00000534300 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
AMBRA1-212ENST00000534300 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
AMBRA1-212ENST00000534300 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
AMBRA1-212ENST00000534300 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
AMBRA1-212ENST00000534300 KRTAP4-9Q9BYQ8 210 aa3.39□□□□□ -1.87
AMBRA1-212ENST00000534300 NEBP20929 6669 aa3.37□□□□□ -1.87
AMBRA1-212ENST00000534300 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
AMBRA1-212ENST00000534300 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
AMBRA1-212ENST00000534300 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
AMBRA1-212ENST00000534300 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
AMBRA1-212ENST00000534300 KMT2DO14686 5537 aa3.19□□□□□ -1.9
AMBRA1-212ENST00000534300 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
AMBRA1-212ENST00000534300 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
AMBRA1-212ENST00000534300 MDN1Q9NU22 5596 aa3.02□□□□□ -1.93
AMBRA1-212ENST00000534300 MUC12Q9UKN1 5478 aa3.01□□□□□ -1.93
AMBRA1-212ENST00000534300 DSTQ03001 7570 aaKnown RBP3.01□□□□□ -1.93
AMBRA1-212ENST00000534300 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
AMBRA1-212ENST00000534300 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
AMBRA1-212ENST00000534300 KRTAP4-6Q9BYQ5 205 aa2.91□□□□□ -1.94
AMBRA1-212ENST00000534300 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
AMBRA1-212ENST00000534300 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
AMBRA1-212ENST00000534300 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
AMBRA1-212ENST00000534300 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
AMBRA1-212ENST00000534300 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
AMBRA1-212ENST00000534300 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
AMBRA1-212ENST00000534300 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
AMBRA1-212ENST00000534300 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
AMBRA1-212ENST00000534300 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
AMBRA1-212ENST00000534300 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
AMBRA1-212ENST00000534300 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
AMBRA1-212ENST00000534300 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
AMBRA1-212ENST00000534300 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
AMBRA1-212ENST00000534300 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
AMBRA1-212ENST00000534300 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
AMBRA1-212ENST00000534300 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
AMBRA1-212ENST00000534300 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
AMBRA1-212ENST00000534300 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
AMBRA1-212ENST00000534300 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.08
AMBRA1-212ENST00000534300 PHGR1C9JFL3 82 aa2□□□□□ -2.09
AMBRA1-212ENST00000534300 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
AMBRA1-212ENST00000534300 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
AMBRA1-212ENST00000534300 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.13
AMBRA1-212ENST00000534300 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
AMBRA1-212ENST00000534300 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
AMBRA1-212ENST00000534300 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 13.5 ms