RNA–Protein interactions for RNA: ENST00000534070.5

CHEK1-216, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-216ENST00000534070 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
CHEK1-216ENST00000534070 KMT2DO14686 5537 aa2.29□□□□□ -2.04
CHEK1-216ENST00000534070 KRTAP4-8A0A0G2JLE6 195 aa2.28□□□□□ -2.04
CHEK1-216ENST00000534070 KRTAP12-3P60328 96 aa2.28□□□□□ -2.05
CHEK1-216ENST00000534070 SSPOA2VEC9 5147 aa2.27□□□□□ -2.05
CHEK1-216ENST00000534070 DSTQ03001 7570 aaKnown RBP2.24□□□□□ -2.05
CHEK1-216ENST00000534070 KRTAP10-5P60370 271 aa2.24□□□□□ -2.05
CHEK1-216ENST00000534070 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
CHEK1-216ENST00000534070 KRTAP4-7Q9BYR0 210 aa2.23□□□□□ -2.05
CHEK1-216ENST00000534070 MT1FP04733 61 aa2.22□□□□□ -2.05
CHEK1-216ENST00000534070 LCE3AQ5TA76 89 aa2.21□□□□□ -2.06
CHEK1-216ENST00000534070 MT1HP80294 61 aa2.21□□□□□ -2.06
CHEK1-216ENST00000534070 KRTAP8-1Q8IUC2 63 aa2.2□□□□□ -2.06
CHEK1-216ENST00000534070 MT2AP02795 61 aa2.18□□□□□ -2.06
CHEK1-216ENST00000534070 FCGBPQ9Y6R7 5405 aaPredicted RBP2.15□□□□□ -2.07
CHEK1-216ENST00000534070 KRTAP4-9Q9BYQ8 210 aa2.14□□□□□ -2.07
CHEK1-216ENST00000534070 KRTAP4-2Q9BYR5 136 aa2.14□□□□□ -2.07
CHEK1-216ENST00000534070 KRTAP4-11Q9BYQ6 195 aa2.13□□□□□ -2.07
CHEK1-216ENST00000534070 CRCT1Q9UGL9 99 aa2.12□□□□□ -2.07
CHEK1-216ENST00000534070 KRTAP19-6Q3LI70 58 aa2.11□□□□□ -2.07
CHEK1-216ENST00000534070 KRTAP2-3P0C7H8 128 aa2.09□□□□□ -2.07
CHEK1-216ENST00000534070 KRTAP2-4Q9BYR9 128 aa2.09□□□□□ -2.07
CHEK1-216ENST00000534070 KRTAP2-1Q9BYU5 128 aa2.09□□□□□ -2.07
CHEK1-216ENST00000534070 KRTAP5-9P26371 169 aa2.09□□□□□ -2.07
CHEK1-216ENST00000534070 KRTAP19-8Q3LI54 63 aa2.08□□□□□ -2.08
CHEK1-216ENST00000534070 SPRR2GQ9BYE4 73 aa2.07□□□□□ -2.08
CHEK1-216ENST00000534070 MT1BP07438 61 aa2.06□□□□□ -2.08
CHEK1-216ENST00000534070 MT1XP80297 61 aa2.05□□□□□ -2.08
CHEK1-216ENST00000534070 SYNE2Q8WXH0 6885 aaKnown RBP2.05□□□□□ -2.08
CHEK1-216ENST00000534070 MUC12Q9UKN1 5478 aa2.03□□□□□ -2.08
CHEK1-216ENST00000534070 KRTAP5-3Q6L8H2 238 aa2.03□□□□□ -2.08
CHEK1-216ENST00000534070 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
CHEK1-216ENST00000534070 KRTAP19-5Q3LI72 72 aa2.02□□□□□ -2.09
CHEK1-216ENST00000534070 KRTAP9-6A8MVA2 160 aa1.98□□□□□ -2.09
CHEK1-216ENST00000534070 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
CHEK1-216ENST00000534070 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
CHEK1-216ENST00000534070 KRTAP4-3Q9BYR4 195 aa1.93□□□□□ -2.1
CHEK1-216ENST00000534070 MACF1Q9UPN3 7388 aaKnown RBP1.87□□□□□ -2.11
CHEK1-216ENST00000534070 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
CHEK1-216ENST00000534070 MT1GP13640 62 aa1.86□□□□□ -2.11
CHEK1-216ENST00000534070 SPRR2FQ96RM1 72 aa1.84□□□□□ -2.12
CHEK1-216ENST00000534070 KRTAP5-4Q6L8H1 288 aa1.82□□□□□ -2.12
CHEK1-216ENST00000534070 KRTAP19-7Q3SYF9 63 aa1.81□□□□□ -2.12
CHEK1-216ENST00000534070 NEBP20929 6669 aa1.79□□□□□ -2.12
CHEK1-216ENST00000534070 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
CHEK1-216ENST00000534070 LCE1BQ5T7P3 118 aa1.78□□□□□ -2.12
CHEK1-216ENST00000534070 KRTAP5-5Q701N2 237 aaPredicted RBP1.78□□□□□ -2.12
CHEK1-216ENST00000534070 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
CHEK1-216ENST00000534070 MT1LQ93083 61 aa1.77□□□□□ -2.13
CHEK1-216ENST00000534070 MT1EP04732 61 aa1.75□□□□□ -2.13
CHEK1-216ENST00000534070 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
CHEK1-216ENST00000534070 MT1AP04731 61 aa1.67□□□□□ -2.14
CHEK1-216ENST00000534070 MT1MQ8N339 61 aa1.67□□□□□ -2.14
CHEK1-216ENST00000534070 KRTAP19-3Q7Z4W3 81 aa1.66□□□□□ -2.14
CHEK1-216ENST00000534070 PRM1P04553 51 aa1.65□□□□□ -2.14
CHEK1-216ENST00000534070 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.15
CHEK1-216ENST00000534070 SPRR2EP22531 72 aa1.63□□□□□ -2.15
CHEK1-216ENST00000534070 SPRR2BP35325 72 aa1.63□□□□□ -2.15
CHEK1-216ENST00000534070 SPRR2AP35326 72 aa1.63□□□□□ -2.15
CHEK1-216ENST00000534070 KRTAP20-1Q3LI63 56 aa1.6□□□□□ -2.15
CHEK1-216ENST00000534070 KRTAP6-1Q3LI64 71 aa1.58□□□□□ -2.16
CHEK1-216ENST00000534070 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
CHEK1-216ENST00000534070 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
CHEK1-216ENST00000534070 KRTAP5-11Q6L8G4 156 aa1.54□□□□□ -2.16
CHEK1-216ENST00000534070 SPRR2DP22532 72 aa1.53□□□□□ -2.16
CHEK1-216ENST00000534070 MT4P47944 62 aa1.52□□□□□ -2.17
CHEK1-216ENST00000534070 KRTAP6-2Q3LI66 62 aa1.51□□□□□ -2.17
CHEK1-216ENST00000534070 KRTAP5-8O75690 187 aa1.49□□□□□ -2.17
CHEK1-216ENST00000534070 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
CHEK1-216ENST00000534070 KRTAP5-1Q6L8H4 278 aa1.44□□□□□ -2.18
CHEK1-216ENST00000534070 MUC5ACP98088 5654 aa1.35□□□□□ -2.19
CHEK1-216ENST00000534070 KRTAP20-2Q3LI61 65 aa1.35□□□□□ -2.19
CHEK1-216ENST00000534070 KRTAP4-4Q9BYR3 166 aa1.27□□□□□ -2.21
CHEK1-216ENST00000534070 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
CHEK1-216ENST00000534070 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
CHEK1-216ENST00000534070 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
CHEK1-216ENST00000534070 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 294 ms