RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 A6NED7 52 aa4.9□□□□□ -1.63
CAPN1-227ENST00000533909 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
CAPN1-227ENST00000533909 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
CAPN1-227ENST00000533909 PP632Q6XCG6 107 aa4.83□□□□□ -1.64
CAPN1-227ENST00000533909 MT1GP13640 62 aa4.81□□□□□ -1.64
CAPN1-227ENST00000533909 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
CAPN1-227ENST00000533909 CDC42SE1Q9NRR8 79 aa4.77□□□□□ -1.65
CAPN1-227ENST00000533909 MT1LQ93083 61 aa4.76□□□□□ -1.65
CAPN1-227ENST00000533909 KRTAP12-3P60328 96 aa4.74□□□□□ -1.65
CAPN1-227ENST00000533909 MT1MQ8N339 61 aa4.72□□□□□ -1.65
CAPN1-227ENST00000533909 DSTQ03001 7570 aaKnown RBP4.67□□□□□ -1.66
CAPN1-227ENST00000533909 BRK1Q8WUW1 75 aa4.63□□□□□ -1.67
CAPN1-227ENST00000533909 ROMO1P60602 79 aa4.59□□□□□ -1.67
CAPN1-227ENST00000533909 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
CAPN1-227ENST00000533909 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
CAPN1-227ENST00000533909 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
CAPN1-227ENST00000533909 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
CAPN1-227ENST00000533909 GPR98Q8WXG9 6306 aa4.52□□□□□ -1.69
CAPN1-227ENST00000533909 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
CAPN1-227ENST00000533909 PRO0628Q9UI54 55 aa4.5□□□□□ -1.69
CAPN1-227ENST00000533909 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
CAPN1-227ENST00000533909 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
CAPN1-227ENST00000533909 MT4P47944 62 aa4.45□□□□□ -1.7
CAPN1-227ENST00000533909 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
CAPN1-227ENST00000533909 HMCN1Q96RW7 5635 aa4.39□□□□□ -1.71
CAPN1-227ENST00000533909 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
CAPN1-227ENST00000533909 KRTAP5-4Q6L8H1 288 aa4.38□□□□□ -1.71
CAPN1-227ENST00000533909 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
CAPN1-227ENST00000533909 KRTAP4-6Q9BYQ5 205 aa4.29□□□□□ -1.72
CAPN1-227ENST00000533909 LOC100996750A0A140TA64 210 aa4.28□□□□□ -1.72
CAPN1-227ENST00000533909 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
CAPN1-227ENST00000533909 KRTAP12-4P60329 112 aa4.23□□□□□ -1.73
CAPN1-227ENST00000533909 SPRR5A0A1B0GTR4 108 aa4.16□□□□□ -1.74
CAPN1-227ENST00000533909 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
CAPN1-227ENST00000533909 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
CAPN1-227ENST00000533909 KTN1-AS1Q86SY8 53 aa4.13□□□□□ -1.75
CAPN1-227ENST00000533909 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
CAPN1-227ENST00000533909 MT1AP04731 61 aa4.06□□□□□ -1.76
CAPN1-227ENST00000533909 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
CAPN1-227ENST00000533909 KRTAP5-10Q6L8G5 202 aa4.03□□□□□ -1.76
CAPN1-227ENST00000533909 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
CAPN1-227ENST00000533909 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
CAPN1-227ENST00000533909 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
CAPN1-227ENST00000533909 H3BS24 57 aa3.9□□□□□ -1.79
CAPN1-227ENST00000533909 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.79
CAPN1-227ENST00000533909 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
CAPN1-227ENST00000533909 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
CAPN1-227ENST00000533909 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
CAPN1-227ENST00000533909 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
CAPN1-227ENST00000533909 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
CAPN1-227ENST00000533909 MT3P25713 68 aa3.74□□□□□ -1.81
CAPN1-227ENST00000533909 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
CAPN1-227ENST00000533909 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
CAPN1-227ENST00000533909 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
CAPN1-227ENST00000533909 AHNAKQ09666 5890 aaKnown RBP3.46□□□□□ -1.85
CAPN1-227ENST00000533909 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
CAPN1-227ENST00000533909 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
CAPN1-227ENST00000533909 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
CAPN1-227ENST00000533909 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
CAPN1-227ENST00000533909 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
CAPN1-227ENST00000533909 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
CAPN1-227ENST00000533909 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
CAPN1-227ENST00000533909 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
CAPN1-227ENST00000533909 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
CAPN1-227ENST00000533909 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
CAPN1-227ENST00000533909 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
CAPN1-227ENST00000533909 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
CAPN1-227ENST00000533909 INE1O15225 51 aa2.83□□□□□ -1.96
CAPN1-227ENST00000533909 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
CAPN1-227ENST00000533909 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
CAPN1-227ENST00000533909 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
CAPN1-227ENST00000533909 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
CAPN1-227ENST00000533909 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
CAPN1-227ENST00000533909 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
CAPN1-227ENST00000533909 PRM1P04553 51 aa2.34□□□□□ -2.03
CAPN1-227ENST00000533909 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
CAPN1-227ENST00000533909 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
CAPN1-227ENST00000533909 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 771.2 ms