RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 LCE5AQ5TCM9 118 aa5.94□□□□□ -1.46
PACSIN3-210ENST00000533686 BRK1Q8WUW1 75 aa5.94□□□□□ -1.46
PACSIN3-210ENST00000533686 KRTAP2-3P0C7H8 128 aa5.92□□□□□ -1.46
PACSIN3-210ENST00000533686 KRTAP12-3P60328 96 aa5.92□□□□□ -1.46
PACSIN3-210ENST00000533686 KRTAP2-4Q9BYR9 128 aa5.92□□□□□ -1.46
PACSIN3-210ENST00000533686 MT1GP13640 62 aa5.88□□□□□ -1.47
PACSIN3-210ENST00000533686 MT1LQ93083 61 aa5.88□□□□□ -1.47
PACSIN3-210ENST00000533686 PP632Q6XCG6 107 aa5.82□□□□□ -1.48
PACSIN3-210ENST00000533686 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
PACSIN3-210ENST00000533686 MT1MQ8N339 61 aa5.77□□□□□ -1.49
PACSIN3-210ENST00000533686 KRTAP2-2Q9BYT5 123 aa5.76□□□□□ -1.49
PACSIN3-210ENST00000533686 KRTAP2-1Q9BYU5 128 aa5.76□□□□□ -1.49
PACSIN3-210ENST00000533686 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
PACSIN3-210ENST00000533686 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
PACSIN3-210ENST00000533686 PMAIP1Q13794 54 aa5.62□□□□□ -1.51
PACSIN3-210ENST00000533686 DSTQ03001 7570 aaKnown RBP5.62□□□□□ -1.51
PACSIN3-210ENST00000533686 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
PACSIN3-210ENST00000533686 KRTAP4-3Q9BYR4 195 aa5.58□□□□□ -1.52
PACSIN3-210ENST00000533686 PRO0628Q9UI54 55 aa5.54□□□□□ -1.52
PACSIN3-210ENST00000533686 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
PACSIN3-210ENST00000533686 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
PACSIN3-210ENST00000533686 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
PACSIN3-210ENST00000533686 PRAC1Q96KF2 57 aa5.3□□□□□ -1.56
PACSIN3-210ENST00000533686 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
PACSIN3-210ENST00000533686 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
PACSIN3-210ENST00000533686 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
PACSIN3-210ENST00000533686 LCE1DQ5T752 114 aa5.2□□□□□ -1.58
PACSIN3-210ENST00000533686 KTN1-AS1Q86SY8 53 aa5.2□□□□□ -1.58
PACSIN3-210ENST00000533686 MT4P47944 62 aa5.17□□□□□ -1.58
PACSIN3-210ENST00000533686 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
PACSIN3-210ENST00000533686 HMCN1Q96RW7 5635 aa5.13□□□□□ -1.59
PACSIN3-210ENST00000533686 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
PACSIN3-210ENST00000533686 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
PACSIN3-210ENST00000533686 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
PACSIN3-210ENST00000533686 MT1AP04731 61 aa5.02□□□□□ -1.61
PACSIN3-210ENST00000533686 SPRR5A0A1B0GTR4 108 aa5.01□□□□□ -1.61
PACSIN3-210ENST00000533686 KRTAP20-2Q3LI61 65 aa4.96□□□□□ -1.62
PACSIN3-210ENST00000533686 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
PACSIN3-210ENST00000533686 SVIPQ8NHG7 77 aa4.89□□□□□ -1.63
PACSIN3-210ENST00000533686 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
PACSIN3-210ENST00000533686 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
PACSIN3-210ENST00000533686 AHNAK2Q8IVF2 5795 aa4.82□□□□□ -1.64
PACSIN3-210ENST00000533686 GPR98Q8WXG9 6306 aa4.81□□□□□ -1.64
PACSIN3-210ENST00000533686 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
PACSIN3-210ENST00000533686 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
PACSIN3-210ENST00000533686 KRTAP5-10Q6L8G5 202 aa4.65□□□□□ -1.67
PACSIN3-210ENST00000533686 MT3P25713 68 aa4.59□□□□□ -1.67
PACSIN3-210ENST00000533686 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
PACSIN3-210ENST00000533686 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
PACSIN3-210ENST00000533686 KRTAP5-7Q6L8G8 165 aa4.43□□□□□ -1.7
PACSIN3-210ENST00000533686 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
PACSIN3-210ENST00000533686 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
PACSIN3-210ENST00000533686 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
PACSIN3-210ENST00000533686 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
PACSIN3-210ENST00000533686 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
PACSIN3-210ENST00000533686 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
PACSIN3-210ENST00000533686 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
PACSIN3-210ENST00000533686 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
PACSIN3-210ENST00000533686 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
PACSIN3-210ENST00000533686 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
PACSIN3-210ENST00000533686 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
PACSIN3-210ENST00000533686 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
PACSIN3-210ENST00000533686 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
PACSIN3-210ENST00000533686 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
PACSIN3-210ENST00000533686 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
PACSIN3-210ENST00000533686 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
PACSIN3-210ENST00000533686 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
PACSIN3-210ENST00000533686 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
PACSIN3-210ENST00000533686 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
PACSIN3-210ENST00000533686 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
PACSIN3-210ENST00000533686 INE1O15225 51 aa3.24□□□□□ -1.89
PACSIN3-210ENST00000533686 PRM1P04553 51 aa3.08□□□□□ -1.92
PACSIN3-210ENST00000533686 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
PACSIN3-210ENST00000533686 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
PACSIN3-210ENST00000533686 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
PACSIN3-210ENST00000533686 H3BS24 57 aa2.37□□□□□ -2.03
PACSIN3-210ENST00000533686 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
PACSIN3-210ENST00000533686 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 115.7 ms