RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
CAPRIN1-215ENST00000533657 KMT2DO14686 5537 aa3.79□□□□□ -1.8
CAPRIN1-215ENST00000533657 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
CAPRIN1-215ENST00000533657 MT1EP04732 61 aa3.78□□□□□ -1.8
CAPRIN1-215ENST00000533657 SPRR2FQ96RM1 72 aa3.77□□□□□ -1.81
CAPRIN1-215ENST00000533657 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
CAPRIN1-215ENST00000533657 KRTAP12-3P60328 96 aa3.75□□□□□ -1.81
CAPRIN1-215ENST00000533657 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
CAPRIN1-215ENST00000533657 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
CAPRIN1-215ENST00000533657 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
CAPRIN1-215ENST00000533657 MT1LQ93083 61 aa3.67□□□□□ -1.82
CAPRIN1-215ENST00000533657 SPRR2EP22531 72 aa3.65□□□□□ -1.83
CAPRIN1-215ENST00000533657 SPRR2BP35325 72 aa3.65□□□□□ -1.83
CAPRIN1-215ENST00000533657 SPRR2AP35326 72 aa3.65□□□□□ -1.83
CAPRIN1-215ENST00000533657 LCE5AQ5TCM9 118 aa3.64□□□□□ -1.83
CAPRIN1-215ENST00000533657 MT1GP13640 62 aa3.64□□□□□ -1.83
CAPRIN1-215ENST00000533657 NEBP20929 6669 aa3.64□□□□□ -1.83
CAPRIN1-215ENST00000533657 MUC12Q9UKN1 5478 aa3.6□□□□□ -1.83
CAPRIN1-215ENST00000533657 MT1MQ8N339 61 aa3.57□□□□□ -1.84
CAPRIN1-215ENST00000533657 MDN1Q9NU22 5596 aa3.56□□□□□ -1.84
CAPRIN1-215ENST00000533657 SPRR2DP22532 72 aa3.53□□□□□ -1.84
CAPRIN1-215ENST00000533657 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
CAPRIN1-215ENST00000533657 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
CAPRIN1-215ENST00000533657 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
CAPRIN1-215ENST00000533657 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
CAPRIN1-215ENST00000533657 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
CAPRIN1-215ENST00000533657 LCE3BQ5TA77 95 aa3.41□□□□□ -1.86
CAPRIN1-215ENST00000533657 KRTAP4-7Q9BYR0 210 aa3.41□□□□□ -1.86
CAPRIN1-215ENST00000533657 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
CAPRIN1-215ENST00000533657 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
CAPRIN1-215ENST00000533657 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
CAPRIN1-215ENST00000533657 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
CAPRIN1-215ENST00000533657 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
CAPRIN1-215ENST00000533657 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
CAPRIN1-215ENST00000533657 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
CAPRIN1-215ENST00000533657 MT1AP04731 61 aa3.15□□□□□ -1.9
CAPRIN1-215ENST00000533657 DSTQ03001 7570 aaKnown RBP3.15□□□□□ -1.91
CAPRIN1-215ENST00000533657 KRTAP5-3Q6L8H2 238 aa3.14□□□□□ -1.91
CAPRIN1-215ENST00000533657 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
CAPRIN1-215ENST00000533657 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
CAPRIN1-215ENST00000533657 LCE1DQ5T752 114 aa3.06□□□□□ -1.92
CAPRIN1-215ENST00000533657 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
CAPRIN1-215ENST00000533657 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
CAPRIN1-215ENST00000533657 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
CAPRIN1-215ENST00000533657 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
CAPRIN1-215ENST00000533657 MT4P47944 62 aa3□□□□□ -1.93
CAPRIN1-215ENST00000533657 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
CAPRIN1-215ENST00000533657 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.94
CAPRIN1-215ENST00000533657 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
CAPRIN1-215ENST00000533657 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
CAPRIN1-215ENST00000533657 PRM1P04553 51 aa2.92□□□□□ -1.94
CAPRIN1-215ENST00000533657 MT3P25713 68 aa2.85□□□□□ -1.95
CAPRIN1-215ENST00000533657 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.95
CAPRIN1-215ENST00000533657 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
CAPRIN1-215ENST00000533657 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
CAPRIN1-215ENST00000533657 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
CAPRIN1-215ENST00000533657 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.97
CAPRIN1-215ENST00000533657 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
CAPRIN1-215ENST00000533657 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
CAPRIN1-215ENST00000533657 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
CAPRIN1-215ENST00000533657 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
CAPRIN1-215ENST00000533657 KRTAP5-8O75690 187 aa2.55□□□□□ -2
CAPRIN1-215ENST00000533657 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
CAPRIN1-215ENST00000533657 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
CAPRIN1-215ENST00000533657 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
CAPRIN1-215ENST00000533657 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
CAPRIN1-215ENST00000533657 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
CAPRIN1-215ENST00000533657 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
CAPRIN1-215ENST00000533657 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
CAPRIN1-215ENST00000533657 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
CAPRIN1-215ENST00000533657 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
CAPRIN1-215ENST00000533657 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
CAPRIN1-215ENST00000533657 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
CAPRIN1-215ENST00000533657 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
CAPRIN1-215ENST00000533657 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
CAPRIN1-215ENST00000533657 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
CAPRIN1-215ENST00000533657 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
CAPRIN1-215ENST00000533657 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 439.7 ms