RNA–Protein interactions for RNA: ENST00000533604.1

CAPN11-205, Transcript of calpain 11, humanhuman

TSL 2

Gene CAPN11, Length 1,051 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-205ENST00000533604 ROMO1P60602 79 aa3.43□□□□□ -1.86
CAPN11-205ENST00000533604 SPRR2EP22531 72 aa3.42□□□□□ -1.86
CAPN11-205ENST00000533604 SPRR2BP35325 72 aa3.42□□□□□ -1.86
CAPN11-205ENST00000533604 SPRR2AP35326 72 aa3.42□□□□□ -1.86
CAPN11-205ENST00000533604 MT1XP80297 61 aa3.42□□□□□ -1.86
CAPN11-205ENST00000533604 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
CAPN11-205ENST00000533604 C10orf95Q9H7T3 257 aa3.41□□□□□ -1.86
CAPN11-205ENST00000533604 TNP1P09430 55 aa3.37□□□□□ -1.87
CAPN11-205ENST00000533604 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
CAPN11-205ENST00000533604 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
CAPN11-205ENST00000533604 KRTAP4-9Q9BYQ8 210 aa3.33□□□□□ -1.88
CAPN11-205ENST00000533604 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
CAPN11-205ENST00000533604 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
CAPN11-205ENST00000533604 SPRR2DP22532 72 aa3.3□□□□□ -1.88
CAPN11-205ENST00000533604 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
CAPN11-205ENST00000533604 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
CAPN11-205ENST00000533604 SPRR2FQ96RM1 72 aa3.29□□□□□ -1.88
CAPN11-205ENST00000533604 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
CAPN11-205ENST00000533604 KRTAP10-12P60413 245 aa3.26□□□□□ -1.89
CAPN11-205ENST00000533604 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
CAPN11-205ENST00000533604 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
CAPN11-205ENST00000533604 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
CAPN11-205ENST00000533604 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
CAPN11-205ENST00000533604 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
CAPN11-205ENST00000533604 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
CAPN11-205ENST00000533604 KRTAP4-8A0A0G2JLE6 195 aa3.18□□□□□ -1.9
CAPN11-205ENST00000533604 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
CAPN11-205ENST00000533604 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
CAPN11-205ENST00000533604 LCE1DQ5T752 114 aa3.14□□□□□ -1.91
CAPN11-205ENST00000533604 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
CAPN11-205ENST00000533604 KRTAP19-5Q3LI72 72 aa3.1□□□□□ -1.91
CAPN11-205ENST00000533604 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
CAPN11-205ENST00000533604 MT1EP04732 61 aa3.02□□□□□ -1.93
CAPN11-205ENST00000533604 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
CAPN11-205ENST00000533604 MT4P47944 62 aa3□□□□□ -1.93
CAPN11-205ENST00000533604 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
CAPN11-205ENST00000533604 MT3P25713 68 aa2.98□□□□□ -1.93
CAPN11-205ENST00000533604 MT1LQ93083 61 aa2.95□□□□□ -1.94
CAPN11-205ENST00000533604 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
CAPN11-205ENST00000533604 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
CAPN11-205ENST00000533604 KRTAP4-7Q9BYR0 210 aa2.94□□□□□ -1.94
CAPN11-205ENST00000533604 MT1GP13640 62 aa2.93□□□□□ -1.94
CAPN11-205ENST00000533604 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
CAPN11-205ENST00000533604 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
CAPN11-205ENST00000533604 MT1MQ8N339 61 aa2.85□□□□□ -1.95
CAPN11-205ENST00000533604 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
CAPN11-205ENST00000533604 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
CAPN11-205ENST00000533604 KRTAP4-3Q9BYR4 195 aa2.78□□□□□ -1.96
CAPN11-205ENST00000533604 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
CAPN11-205ENST00000533604 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
CAPN11-205ENST00000533604 KRTAP9-6A8MVA2 160 aa2.66□□□□□ -1.98
CAPN11-205ENST00000533604 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
CAPN11-205ENST00000533604 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
CAPN11-205ENST00000533604 KRTAP5-8O75690 187 aa2.57□□□□□ -2
CAPN11-205ENST00000533604 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
CAPN11-205ENST00000533604 MT1AP04731 61 aa2.52□□□□□ -2.01
CAPN11-205ENST00000533604 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
CAPN11-205ENST00000533604 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
CAPN11-205ENST00000533604 KRTAP6-1Q3LI64 71 aa2.47□□□□□ -2.01
CAPN11-205ENST00000533604 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
CAPN11-205ENST00000533604 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
CAPN11-205ENST00000533604 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
CAPN11-205ENST00000533604 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
CAPN11-205ENST00000533604 LCE1EQ5T753 118 aa2.22□□□□□ -2.05
CAPN11-205ENST00000533604 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
CAPN11-205ENST00000533604 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
CAPN11-205ENST00000533604 INE1O15225 51 aa2.11□□□□□ -2.07
CAPN11-205ENST00000533604 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
CAPN11-205ENST00000533604 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
CAPN11-205ENST00000533604 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
CAPN11-205ENST00000533604 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
CAPN11-205ENST00000533604 PRM1P04553 51 aa1.76□□□□□ -2.13
CAPN11-205ENST00000533604 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
CAPN11-205ENST00000533604 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
CAPN11-205ENST00000533604 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
CAPN11-205ENST00000533604 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
CAPN11-205ENST00000533604 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
CAPN11-205ENST00000533604 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 76.5 ms