RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
RAD50-209ENST00000533482 MT1LQ93083 61 aa4.16□□□□□ -1.74
RAD50-209ENST00000533482 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
RAD50-209ENST00000533482 MT1EP04732 61 aa4.15□□□□□ -1.75
RAD50-209ENST00000533482 KMT2DO14686 5537 aa4.15□□□□□ -1.75
RAD50-209ENST00000533482 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
RAD50-209ENST00000533482 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
RAD50-209ENST00000533482 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
RAD50-209ENST00000533482 KRTAP19-6Q3LI70 58 aa4.08□□□□□ -1.76
RAD50-209ENST00000533482 SYNE2Q8WXH0 6885 aaKnown RBP4.07□□□□□ -1.76
RAD50-209ENST00000533482 KRTAP9-2Q9BYQ4 174 aa4.06□□□□□ -1.76
RAD50-209ENST00000533482 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
RAD50-209ENST00000533482 SPRR2DP22532 72 aa4.06□□□□□ -1.76
RAD50-209ENST00000533482 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
RAD50-209ENST00000533482 MT1MQ8N339 61 aa3.98□□□□□ -1.77
RAD50-209ENST00000533482 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
RAD50-209ENST00000533482 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
RAD50-209ENST00000533482 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
RAD50-209ENST00000533482 LCE2DQ5TA82 110 aaPredicted RBP3.85□□□□□ -1.79
RAD50-209ENST00000533482 SSPOA2VEC9 5147 aa3.81□□□□□ -1.8
RAD50-209ENST00000533482 MACF1Q9UPN3 7388 aaKnown RBP3.78□□□□□ -1.81
RAD50-209ENST00000533482 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
RAD50-209ENST00000533482 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
RAD50-209ENST00000533482 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
RAD50-209ENST00000533482 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
RAD50-209ENST00000533482 KRTAP2-1Q9BYU5 128 aa3.74□□□□□ -1.81
RAD50-209ENST00000533482 MT4P47944 62 aa3.74□□□□□ -1.81
RAD50-209ENST00000533482 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
RAD50-209ENST00000533482 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
RAD50-209ENST00000533482 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
RAD50-209ENST00000533482 MT3P25713 68 aa3.58□□□□□ -1.84
RAD50-209ENST00000533482 MT1AP04731 61 aa3.57□□□□□ -1.84
RAD50-209ENST00000533482 PRM1P04553 51 aa3.56□□□□□ -1.84
RAD50-209ENST00000533482 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
RAD50-209ENST00000533482 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.54□□□□□ -1.84
RAD50-209ENST00000533482 KRTAP9-7A8MTY7 169 aa3.53□□□□□ -1.84
RAD50-209ENST00000533482 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
RAD50-209ENST00000533482 LCE1DQ5T752 114 aa3.46□□□□□ -1.86
RAD50-209ENST00000533482 KRTAP6-3Q3LI67 103 aa3.45□□□□□ -1.86
RAD50-209ENST00000533482 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
RAD50-209ENST00000533482 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
RAD50-209ENST00000533482 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
RAD50-209ENST00000533482 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
RAD50-209ENST00000533482 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
RAD50-209ENST00000533482 NEBP20929 6669 aa3.21□□□□□ -1.9
RAD50-209ENST00000533482 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
RAD50-209ENST00000533482 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
RAD50-209ENST00000533482 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
RAD50-209ENST00000533482 KRTAP4-6Q9BYQ5 205 aa3.12□□□□□ -1.91
RAD50-209ENST00000533482 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
RAD50-209ENST00000533482 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
RAD50-209ENST00000533482 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
RAD50-209ENST00000533482 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.96
RAD50-209ENST00000533482 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
RAD50-209ENST00000533482 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
RAD50-209ENST00000533482 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
RAD50-209ENST00000533482 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
RAD50-209ENST00000533482 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
RAD50-209ENST00000533482 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
RAD50-209ENST00000533482 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
RAD50-209ENST00000533482 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
RAD50-209ENST00000533482 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
RAD50-209ENST00000533482 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
RAD50-209ENST00000533482 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
RAD50-209ENST00000533482 KRTAP5-3Q6L8H2 238 aa2.43□□□□□ -2.02
RAD50-209ENST00000533482 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
RAD50-209ENST00000533482 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
RAD50-209ENST00000533482 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
RAD50-209ENST00000533482 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
RAD50-209ENST00000533482 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
RAD50-209ENST00000533482 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
RAD50-209ENST00000533482 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
RAD50-209ENST00000533482 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
RAD50-209ENST00000533482 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.12
RAD50-209ENST00000533482 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
RAD50-209ENST00000533482 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
RAD50-209ENST00000533482 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
RAD50-209ENST00000533482 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms