RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 LCE3CQ5T5A8 94 aa2.2□□□□□ -2.06
CKAP5-212ENST00000533413 USH2AO75445 5202 aa2.19□□□□□ -2.06
CKAP5-212ENST00000533413 SPRR2GQ9BYE4 73 aa2.19□□□□□ -2.06
CKAP5-212ENST00000533413 LCE1AQ5T7P2 110 aa2.19□□□□□ -2.06
CKAP5-212ENST00000533413 KRTAP19-6Q3LI70 58 aa2.17□□□□□ -2.06
CKAP5-212ENST00000533413 KRTAP19-8Q3LI54 63 aa2.16□□□□□ -2.06
CKAP5-212ENST00000533413 SSPOA2VEC9 5147 aa2.16□□□□□ -2.06
CKAP5-212ENST00000533413 LCE3AQ5TA76 89 aa2.16□□□□□ -2.06
CKAP5-212ENST00000533413 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
CKAP5-212ENST00000533413 MT1BP07438 61 aa2.11□□□□□ -2.07
CKAP5-212ENST00000533413 KRTAP8-1Q8IUC2 63 aa2.09□□□□□ -2.07
CKAP5-212ENST00000533413 FCGBPQ9Y6R7 5405 aaPredicted RBP2.09□□□□□ -2.07
CKAP5-212ENST00000533413 KRTAP10-5P60370 271 aa2.08□□□□□ -2.08
CKAP5-212ENST00000533413 KRTAP6-3Q3LI67 103 aa2.08□□□□□ -2.08
CKAP5-212ENST00000533413 KRTAP12-3P60328 96 aa2.06□□□□□ -2.08
CKAP5-212ENST00000533413 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
CKAP5-212ENST00000533413 KRTAP10-12P60413 245 aa2.05□□□□□ -2.08
CKAP5-212ENST00000533413 MT1XP80297 61 aa2.02□□□□□ -2.09
CKAP5-212ENST00000533413 MT3P25713 68 aa1.99□□□□□ -2.09
CKAP5-212ENST00000533413 SYNE2Q8WXH0 6885 aaKnown RBP1.98□□□□□ -2.09
CKAP5-212ENST00000533413 MACF1Q9UPN3 7388 aaKnown RBP1.98□□□□□ -2.09
CKAP5-212ENST00000533413 KRTAP10-7P60409 375 aaPredicted RBP1.97□□□□□ -2.09
CKAP5-212ENST00000533413 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
CKAP5-212ENST00000533413 KRTAP5-9P26371 169 aa1.96□□□□□ -2.1
CKAP5-212ENST00000533413 KRTAP2-3P0C7H8 128 aa1.94□□□□□ -2.1
CKAP5-212ENST00000533413 KRTAP2-4Q9BYR9 128 aa1.94□□□□□ -2.1
CKAP5-212ENST00000533413 KRTAP2-1Q9BYU5 128 aa1.94□□□□□ -2.1
CKAP5-212ENST00000533413 KRTAP19-5Q3LI72 72 aa1.93□□□□□ -2.1
CKAP5-212ENST00000533413 LCE3DQ9BYE3 92 aa1.93□□□□□ -2.1
CKAP5-212ENST00000533413 NEBP20929 6669 aa1.89□□□□□ -2.11
CKAP5-212ENST00000533413 SPRR2FQ96RM1 72 aa1.87□□□□□ -2.11
CKAP5-212ENST00000533413 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
CKAP5-212ENST00000533413 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
CKAP5-212ENST00000533413 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
CKAP5-212ENST00000533413 SPRR2EP22531 72 aa1.85□□□□□ -2.11
CKAP5-212ENST00000533413 SPRR2BP35325 72 aa1.85□□□□□ -2.11
CKAP5-212ENST00000533413 SPRR2AP35326 72 aa1.85□□□□□ -2.11
CKAP5-212ENST00000533413 MUC12Q9UKN1 5478 aa1.84□□□□□ -2.11
CKAP5-212ENST00000533413 KRTAP9-6A8MVA2 160 aa1.83□□□□□ -2.12
CKAP5-212ENST00000533413 KRTAP20-1Q3LI63 56 aa1.82□□□□□ -2.12
CKAP5-212ENST00000533413 KMT2DO14686 5537 aa1.82□□□□□ -2.12
CKAP5-212ENST00000533413 MDN1Q9NU22 5596 aa1.81□□□□□ -2.12
CKAP5-212ENST00000533413 SPRR2DP22532 72 aa1.79□□□□□ -2.12
CKAP5-212ENST00000533413 KRTAP19-7Q3SYF9 63 aa1.79□□□□□ -2.12
CKAP5-212ENST00000533413 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
CKAP5-212ENST00000533413 MT1EP04732 61 aa1.78□□□□□ -2.12
CKAP5-212ENST00000533413 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
CKAP5-212ENST00000533413 MT1LQ93083 61 aa1.76□□□□□ -2.13
CKAP5-212ENST00000533413 KRTAP19-3Q7Z4W3 81 aa1.76□□□□□ -2.13
CKAP5-212ENST00000533413 MT1GP13640 62 aa1.74□□□□□ -2.13
CKAP5-212ENST00000533413 DSTQ03001 7570 aaKnown RBP1.7□□□□□ -2.14
CKAP5-212ENST00000533413 KRTAP4-4Q9BYR3 166 aa1.69□□□□□ -2.14
CKAP5-212ENST00000533413 MT1MQ8N339 61 aa1.69□□□□□ -2.14
CKAP5-212ENST00000533413 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
CKAP5-212ENST00000533413 KRTAP4-3Q9BYR4 195 aa1.65□□□□□ -2.14
CKAP5-212ENST00000533413 KRTAP5-4Q6L8H1 288 aa1.62□□□□□ -2.15
CKAP5-212ENST00000533413 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
CKAP5-212ENST00000533413 KRTAP5-5Q701N2 237 aaPredicted RBP1.57□□□□□ -2.16
CKAP5-212ENST00000533413 MT1AP04731 61 aa1.56□□□□□ -2.16
CKAP5-212ENST00000533413 SYNE1Q8NF91 8797 aaKnown RBP1.54□□□□□ -2.16
CKAP5-212ENST00000533413 PRM1P04553 51 aa1.54□□□□□ -2.16
CKAP5-212ENST00000533413 MT4P47944 62 aa1.51□□□□□ -2.17
CKAP5-212ENST00000533413 KRTAP6-1Q3LI64 71 aa1.49□□□□□ -2.17
CKAP5-212ENST00000533413 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
CKAP5-212ENST00000533413 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
CKAP5-212ENST00000533413 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
CKAP5-212ENST00000533413 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
CKAP5-212ENST00000533413 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
CKAP5-212ENST00000533413 LCE1CQ5T751 118 aa1.41□□□□□ -2.18
CKAP5-212ENST00000533413 LCE1BQ5T7P3 118 aa1.41□□□□□ -2.18
CKAP5-212ENST00000533413 KRTAP5-2Q701N4 177 aa1.41□□□□□ -2.18
CKAP5-212ENST00000533413 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
CKAP5-212ENST00000533413 KRTAP5-8O75690 187 aa1.29□□□□□ -2.2
CKAP5-212ENST00000533413 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
CKAP5-212ENST00000533413 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
CKAP5-212ENST00000533413 KRTAP21-2Q3LI59 83 aa0.95□□□□□ -2.26
CKAP5-212ENST00000533413 PHGR1C9JFL3 82 aa0.88□□□□□ -2.27
CKAP5-212ENST00000533413 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 65.2 ms