RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.53□□□□□ -1.2
AP004608.1-202ENST00000533390 KRTAP19-3Q7Z4W3 81 aa7.53□□□□□ -1.2
AP004608.1-202ENST00000533390 MT1GP13640 62 aa7.48□□□□□ -1.21
AP004608.1-202ENST00000533390 MUC12Q9UKN1 5478 aa7.4□□□□□ -1.22
AP004608.1-202ENST00000533390 MT1MQ8N339 61 aa7.39□□□□□ -1.23
AP004608.1-202ENST00000533390 KRTAP5-9P26371 169 aa7.38□□□□□ -1.23
AP004608.1-202ENST00000533390 LCE5AQ5TCM9 118 aa7.34□□□□□ -1.23
AP004608.1-202ENST00000533390 KRTAP9-6A8MVA2 160 aa7.33□□□□□ -1.24
AP004608.1-202ENST00000533390 SYNE2Q8WXH0 6885 aaKnown RBP7.33□□□□□ -1.24
AP004608.1-202ENST00000533390 KRTAP9-7A8MTY7 169 aa7.28□□□□□ -1.24
AP004608.1-202ENST00000533390 KRTAP4-3Q9BYR4 195 aa7.26□□□□□ -1.25
AP004608.1-202ENST00000533390 H3BS24 57 aa7.24□□□□□ -1.25
AP004608.1-202ENST00000533390 LCE1AQ5T7P2 110 aa7.19□□□□□ -1.26
AP004608.1-202ENST00000533390 KRTAP6-3Q3LI67 103 aa7.17□□□□□ -1.26
AP004608.1-202ENST00000533390 SPRR2EP22531 72 aa7.15□□□□□ -1.26
AP004608.1-202ENST00000533390 SPRR2BP35325 72 aa7.15□□□□□ -1.26
AP004608.1-202ENST00000533390 SPRR2AP35326 72 aa7.15□□□□□ -1.26
AP004608.1-202ENST00000533390 LOC100996750A0A140TA64 210 aa7.07□□□□□ -1.28
AP004608.1-202ENST00000533390 MDN1Q9NU22 5596 aa7□□□□□ -1.29
AP004608.1-202ENST00000533390 A0A0A0MQY5 61 aa6.98□□□□□ -1.29
AP004608.1-202ENST00000533390 SPRR2DP22532 72 aa6.88□□□□□ -1.31
AP004608.1-202ENST00000533390 KRTAP2-3P0C7H8 128 aa6.87□□□□□ -1.31
AP004608.1-202ENST00000533390 KRTAP2-4Q9BYR9 128 aa6.87□□□□□ -1.31
AP004608.1-202ENST00000533390 KRTAP2-1Q9BYU5 128 aa6.87□□□□□ -1.31
AP004608.1-202ENST00000533390 DSTQ03001 7570 aaKnown RBP6.85□□□□□ -1.31
AP004608.1-202ENST00000533390 NEBP20929 6669 aa6.77□□□□□ -1.33
AP004608.1-202ENST00000533390 KRTAP5-5Q701N2 237 aaPredicted RBP6.61□□□□□ -1.35
AP004608.1-202ENST00000533390 LCE3BQ5TA77 95 aa6.58□□□□□ -1.36
AP004608.1-202ENST00000533390 MT1AP04731 61 aa6.58□□□□□ -1.36
AP004608.1-202ENST00000533390 KRTAP6-1Q3LI64 71 aa6.52□□□□□ -1.37
AP004608.1-202ENST00000533390 INE1O15225 51 aa6.47□□□□□ -1.37
AP004608.1-202ENST00000533390 KRTAP20-1Q3LI63 56 aa6.41□□□□□ -1.38
AP004608.1-202ENST00000533390 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
AP004608.1-202ENST00000533390 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
AP004608.1-202ENST00000533390 KRTAP5-4Q6L8H1 288 aa6.21□□□□□ -1.42
AP004608.1-202ENST00000533390 KRTAP2-2Q9BYT5 123 aa6.17□□□□□ -1.42
AP004608.1-202ENST00000533390 KRTAP12-4P60329 112 aa6.15□□□□□ -1.43
AP004608.1-202ENST00000533390 LCE4AQ5TA78 99 aa6.09□□□□□ -1.44
AP004608.1-202ENST00000533390 KRTAP4-9Q9BYQ8 210 aa6.06□□□□□ -1.44
AP004608.1-202ENST00000533390 MT4P47944 62 aa5.98□□□□□ -1.45
AP004608.1-202ENST00000533390 KRTAP6-2Q3LI66 62 aa5.97□□□□□ -1.45
AP004608.1-202ENST00000533390 MT3P25713 68 aa5.96□□□□□ -1.45
AP004608.1-202ENST00000533390 KRTAP4-6Q9BYQ5 205 aa5.92□□□□□ -1.46
AP004608.1-202ENST00000533390 LCE3DQ9BYE3 92 aa5.89□□□□□ -1.47
AP004608.1-202ENST00000533390 KRTAP20-2Q3LI61 65 aa5.83□□□□□ -1.48
AP004608.1-202ENST00000533390 LCE1DQ5T752 114 aa5.81□□□□□ -1.48
AP004608.1-202ENST00000533390 LCE3EQ5T5B0 92 aa5.76□□□□□ -1.49
AP004608.1-202ENST00000533390 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
AP004608.1-202ENST00000533390 HMCN1Q96RW7 5635 aa5.63□□□□□ -1.51
AP004608.1-202ENST00000533390 KRTAP5-3Q6L8H2 238 aa5.58□□□□□ -1.52
AP004608.1-202ENST00000533390 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
AP004608.1-202ENST00000533390 AHNAK2Q8IVF2 5795 aa5.2□□□□□ -1.58
AP004608.1-202ENST00000533390 PRM1P04553 51 aa5.12□□□□□ -1.59
AP004608.1-202ENST00000533390 LCE1EQ5T753 118 aa5.1□□□□□ -1.59
AP004608.1-202ENST00000533390 GPR98Q8WXG9 6306 aa5.08□□□□□ -1.6
AP004608.1-202ENST00000533390 KRTAP5-10Q6L8G5 202 aa5.01□□□□□ -1.61
AP004608.1-202ENST00000533390 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
AP004608.1-202ENST00000533390 KRTAP5-1Q6L8H4 278 aa4.88□□□□□ -1.63
AP004608.1-202ENST00000533390 LCE1BQ5T7P3 118 aa4.84□□□□□ -1.63
AP004608.1-202ENST00000533390 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
AP004608.1-202ENST00000533390 LCE1CQ5T751 118 aa4.75□□□□□ -1.65
AP004608.1-202ENST00000533390 MUC5ACP98088 5654 aa4.74□□□□□ -1.65
AP004608.1-202ENST00000533390 KRTAP4-2Q9BYR5 136 aa4.74□□□□□ -1.65
AP004608.1-202ENST00000533390 KRTAP5-7Q6L8G8 165 aa4.72□□□□□ -1.65
AP004608.1-202ENST00000533390 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
AP004608.1-202ENST00000533390 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
AP004608.1-202ENST00000533390 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
AP004608.1-202ENST00000533390 KRTAP21-2Q3LI59 83 aa4.24□□□□□ -1.73
AP004608.1-202ENST00000533390 MUC5BQ9HC84 5762 aaPredicted RBP4.19□□□□□ -1.74
AP004608.1-202ENST00000533390 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
AP004608.1-202ENST00000533390 AHNAKQ09666 5890 aaKnown RBP4.06□□□□□ -1.76
AP004608.1-202ENST00000533390 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
AP004608.1-202ENST00000533390 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
AP004608.1-202ENST00000533390 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
AP004608.1-202ENST00000533390 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
AP004608.1-202ENST00000533390 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
AP004608.1-202ENST00000533390 MUC16Q8WXI7 14507 aa2.36□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 206.1 ms